KEGG   Nanorana parkeri (Xizang Plateau frog): 108790427
Entry
108790427         CDS       T04897                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108790427 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108790427 (CSTF1)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     108790427 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd CSTF1_dimer Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_VPS8 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 VPS8_N PROPPIN Frtz
Other DBs
NCBI-GeneID: 108790427
NCBI-ProteinID: XP_018416184
LinkDB
Position
Unknown
AA seq 431 aa
MYRYKITLKDRHQLYKLIISQLLYDGHINIANGLINEVKLNVVCPPSEQLLHLIKVGMEN
DDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSKDYTMKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIIVGTQHPT
LRLYDVNTFQCFVSCNPQDQHTDAICSVNYNPTANTYVTCSKDGCIKLWDGVSNRCVNTW
DKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRMLVKYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacagatacaagatcacgctgaaagatcggcaccagctctacaagctgatcatcagc
cagctcctctacgatggacacatcaacatcgccaacgggctgatcaatgaggtcaaactg
aacgtggtgtgtcccccctctgagcagctcctccacctcatcaaagtgggtatggaaaac
gatgacagcgccgtgcagtacgccatcggccgatccgatacggtggcccccggaaccggc
attgacctggagttcgatgcagatgtacagacgatgtctccggaggcctcggaatacgag
acctgctacgtcacctcccataagggtccctgccgagtggccacgtacagccgggatggg
cagctgatcgccaccggttctgccgacgcctcgatcaagatcctggacacggagcggatg
ttggccaagagcgccatgccgatagaggtgatgatgaacgagaccgcccaacagaacatg
gagaaccaccccgtgatccgcactttgtatgaccacgtggatgaggtcacctgtctggcc
ttccacccgaccgagcagatcttggcctcgggatccaaagactacaccatgaaactgttc
gattactccaaaccgtcagccaaaagagccttcaagtacatccaggaagcggagatgttg
cgatcgatttcgttccacccgtcaggagacttcatcatcgtcggcacacagcacccaacg
ctacgcctttatgacgtcaataccttccagtgcttcgtctcctgcaaccctcaggaccag
cacacggacgccatctgctccgtcaactataaccccacagccaacacctacgtcacttgc
agcaaggatggctgcatcaagttgtgggacggcgtgtccaaccgctgcgtcaacacgtgg
gacaaggcccacgatggggccgaagtatgctcggccatcttctccaaaaattccaagtac
atcctgtccagcgggaaggactctgtggccaagctttgggagatctccacggggaggatg
ctggtcaagtatacaggtgccgggctgagtggacgccaggttcaccggactcaagccgtc
ttcaaccacaccgaagattacgtccttctcccagacgaacggaccatcagcctgtgctgc
tgggactcccgaacggcagaacgtcgcaacctcctctcattgggtcacaacaacatcgtg
cgctgcatcgttcactctcccaccaaccctggattcatgacctgcagcgacgatttccga
gcccgcttctggtatcgccgctccaccactgactga

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