Nanorana parkeri (Xizang Plateau frog): 108790999 Help Entry 108790999         CDS       T04897                                  Symbol SPG11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism npr  Nanorana parkeri (Xizang Plateau frog) Brite KEGG Orthology (KO) [BR:npr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:npr03400]     108790999 (SPG11) DNA repair and recombination proteins [BR:npr03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      108790999 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C DUF4315 Motif Other DBs NCBI-GeneID:  108790999 NCBI-ProteinID:  XP_018416859 LinkDB All DBs Position Unknown AA seq 1265 aa AA seqDB search SLPPFLPSKFFTWQPTNPFAAGENITELPHFSCPRLVSKYAIQEKLDIFFYLRSGRPSMA FYNFILNQLLRSETPQQLIKQAAEDVYVLALSSFSVSSIIASCVCFLELLGVSSHKLRVD VNVANIIQKNTISNPEEPAYKSHTQELAQRLLKLVDNETEAAKDLLMSLEEVVAVDLEKE DSSSCNGLWVTAVQFCHLHSIPTSCLHLRHFARKQNWLQLLVHANSQEQIFLVLNELNPV LGSHIALALQGNGSAHCTIQETDMETNPNTVHHVLQKCLSTAEEGQTLLKECGRHGVPLF SVLATCTENADILSCMCAWIVTSVNATTHLEITQTLSTPEDHKWNLEDLTQIWNIVLGRK DSGTLHKAFTIFMEDCPLLLLLDMFELCLEYKDYSQAKERILEFQKKLKELQSVDDASTF PVPVVWLQTQASHLLRVLLLQSRTSYEVQKVLQLLCDATCQPLCGDLDIHKLRVLTEIIE DQPFFIRRELLNDYSPAALQEECQRLLQILLDEGQFSLAHQVAKLAELPTDNLVIEEVLQ IRLLMQELGQWECPQSRAQHWRKCHEIFNTNNLSPLMASSFFRSQASHYMAPTVLTAEKM ESLAEQELLLTLSGHWLSKDDSTPVVTLEELEQQIWKCRIEQEIVDSSGGLRLLPALSAF ASLTTDFSFSSIPVLNTPLLLDIATLPPLCNTTQDIPDCSRVLSSLIDLLLDESKVHEAS RVCRYFQLSHLDVWIVLSCRALASGEMSIHQLHPGIQNILAAGIEAQENIWSRRKRLQSS SSVESPTTQSPTDPILMNLEILKGTCKHGKTFCRQLLCMYELSQDLGCSFLEVSSRDPSE VLRTVLSKNRPELADTAQAVISSHGLAPETVAQIVAEERLKLWRTLDKEGGQAEIYNVSE MRANFLQFAKLCPDPNLVGLNLLEHLETVPLTELQAIIEVLISAHDCFSLTCHLEGIRRV LHVCRHLTEMHLAPKQEYSLMVRLLSGIGRYNDMVYVFDILHKNQHFELLLRKQLDTKGG LQTALLEYIKRCHPGDSEKHNMTALCFSLHRDIGHNHEHAAKIQLKLIQSQPWEYWMSEL EELKSSIMKALTLLIDAAESYSKDSCVRQSLRCARLTRLLTLQLHLLKSGHKTRLINLDR ENLMEAILALPRFYQAVILTEAYDVQPDWAEVLYNKVVLGGDFQYLKELKQRQLLNKGVF EQISNKCKLNPPGVTGLQNLKCVIGDCEDINVRYNLAIENNFYDITDVLMRDSQTRCCLT DMLSQ NT seq 3798 nt NT seq  +upstreamnt  +downstreamnt tctcttcccccttttctcccatcaaaattcttcacgtggcagcccacaaacccttttgca gcaggagagaatattacggagctccctcacttctcctgcccacggctggtcagtaaatac gccatacaagagaagctagatattttcttctacttacgcagtggacgcccatcaatggct ttctacaatttcattttgaatcagctactgagaagcgaaacacctcaacagttaatcaag caggctgctgaagatgtctatgtgttggccctgtcctcttttagcgtctcctctatcatc gcctcctgcgtgtgctttcttgagctacttggagtcagtagtcacaagttacgggtagat gtcaatgtggccaacattatccagaagaacactatatctaacccagaggaaccagcatac aaatcccatacgcaggaattagcacaaagattgttaaagctggtggacaatgagaccgag gctgctaaagatcttttaatgagcttggaggaagttgtggctgtggatttggaaaaagag gacagcagttcttgcaatggcttatgggtcacggctgtacagttttgtcacttgcactcc attccgacaagctgtttacatctgagacactttgcacggaaacaaaattggctgcaactc cttgttcacgcaaacagccaggagcagattttccttgttctgaatgagctcaaccctgtt ttgggtagccacatcgccttagccctgcagggtaacgggtctgctcactgcaccatacag gaaacggacatggagacaaacccaaatactgtccatcatgttctgcaaaaatgcctcagt acagcggaagagggacagacacttctgaaagagtgcgggaggcacggtgtacctctgttt agtgtgttagcaacttgtacagagaatgcagacatcctctcctgtatgtgcgcttggatt gttacatcggtgaatgctaccacacacttagaaattacacagacgttgtcgactcctgaa gaccacaagtggaacctagaagatctcacacagatctggaatattgtgctgggaaggaag gacagtgggacattacacaaagcattcaccatatttatggaggactgcccactgctgctc ttgcttgatatgtttgaactctgtctggaatacaaggattattcacaagctaaagaaaga atactggaattccagaagaaactaaaggagctccagtctgttgatgacgcctctacattt ccagtcccagtagtgtggcttcagacccaagcatctcatcttctgcgggttctcctcctc cagagccgaacttcatacgaagtgcagaaagttttgcagcttctgtgtgacgccacctgt cagcctttatgtggagatctggatatacacaaactaagggttctcactgaaatcatagag gaccaaccattcttcatcagaagggaacttctaaatgactatagtcctgcagcactacag gaagaatgtcagaggcttctgcagatacttctggatgagggacagttctctctggcacat caagtagcaaaactggcagaactgcccactgacaacctggtcatagaggaggtgttgcag atccggctcctaatgcaagagcttgggcagtgggaatgtcctcagagtcgggcacagcac tggaggaagtgtcatgagattttcaacaccaacaacctttccccattgatggcatccagc ttcttccgatctcaggcatcccattacatggcccctacagtgctcacggcagagaaaatg gaatccttggcagaacaggagcttttattgactctttctggacattggctttcaaaggat gatagtacaccagtggtgactttagaggagttggaacagcagatctggaagtgtcgcatt gagcaggagatagtagatagtagtggtgggctacgattgctccctgcactgtctgcattc gctagtctgaccacagatttctccttctcttctatacctgtgcttaacacccctctgctg ctagatattgccactttgcctccactttgtaataccactcaggatataccagactgctcc cgggtactgagctccctcatagatctgcttctagatgaaagcaaggttcacgaggccagc cgtgtatgcaggtacttccagctgtcccatttggatgtatggattgtgctgagctgtagg gctctggcctcaggggaaatgtcaatacatcagctgcatcctggcattcagaatatcctt gcagcaggcatagaggcacaagagaacatatggagccgcagaaaaagactacagagctca tccagtgtggagtctccaaccactcagagccccactgaccccatcttgatgaatctggag atcttgaaaggtacctgtaagcatggcaagacgttttgcagacaactgctgtgtatgtac gagctgagccaggatcttggttgttccttcttggaagtgtcttctcgagatccaagtgaa gttctgcgtactgtgctgtccaagaatcgccctgagcttgctgatacagcgcaggcagtt ataagctcccatgggctggctccagagacggtggcccaaatagtagccgaggagcgcctg aaactctggaggactctggacaaggaaggagggcaagcggaaatatataatgtctctgag atgagagccaactttttgcaatttgcaaagctgtgtcctgacccaaatctggtggggtta aatctactggagcatctggagactgttccccttactgagctacaagccattattgaggtc ctcatctctgcacatgattgcttcagtctgacttgtcacttggaggggataaggcgtgtt ttacatgtatgccgccatctgacggagatgcacttggcaccaaaacaagagtatagtctc atggttaggctcctgtctgggatcggtcgctacaatgatatggtttatgtgtttgacatt ctacataagaaccagcactttgagcttctgctgaggaaacagctggatactaaaggtgga ttgcagacagcgcttctggagtatattaaacgttgtcatcctggtgacagtgaaaaacac aacatgaccgcactatgctttagcctgcaccgtgatatcggccacaaccatgaacatgca gcaaagatccaactcaagttaatccagtctcaaccttgggaatattggatgtctgaatta gaagagctgaaatcttccattatgaaggcactcactctgcttattgatgctgctgagagc tattcaaaggattcatgtgtccgtcagtccctgcgatgtgcccgcctcacccgtcttctg actctacagcttcacctattgaagagtggtcacaaaactaggctcatcaatttggatcga gagaacttaatggaggccatattggcactgccacgattctaccaggctgttatacttact gaagcttatgacgtgcagccagactgggctgaggttctgtataacaaagtggttcttgga ggtgacttccagtatctaaaagaactgaagcagcggcagttgctcaacaaaggagtgttt gagcagatatccaacaagtgtaaactgaaccccccaggagtgactggactgcagaacttg aaatgcgtcatcggtgattgcgaggacattaacgtgcgatacaatttagccattgagaac aatttctatgacatcactgatgtcctgatgagagactcccagactcgctgttgtctcact gatatgctgtctcagtaa

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