Nanorana parkeri (Xizang Plateau frog): 108791002
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Entry
108791002 CDS
T04897
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03440
Homologous recombination
npr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108791002 (BLM)
03460 Fanconi anemia pathway
108791002 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npr03032
]
108791002 (BLM)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108791002 (BLM)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108791002 (BLM)
DNA replication proteins [BR:
npr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108791002 (BLM)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
108791002 (BLM)
Bloom's syndrome complex (BTR)
108791002 (BLM)
FA (Fanconi anemia) pathway
108791002 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
Helicase_C
RecQ_Zn_bind
BDHCT
RQC
HRDC
BDHCT_assoc
ResIII
Motif
Other DBs
NCBI-GeneID:
108791002
NCBI-ProteinID:
XP_018416862
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MASLPQNNLQKQLELFSAKVVGNKLSLQKSKPSVFTFKKKSPSDGSAVKNFSHTNQQVPL
KDKNVNVALKQSSLKHLIAPSKAKETSKLNILFTPVPVKPPEPSPLLHPAKPCQKNSNGK
NETSKGNGFFTPVCAKPPEPSPPLHPTRTVQQSANGKSETIRQVDSLPKKTGCNTSISST
LSLEEWDDINDFDTSVSPPKSQIKKLCKTPEKCNKRPSVTSPKSQTLQVTSVNKETVKNC
VEKWPDLVPISSCTETANPSLDKSSNDTDVVVCDEVSEPEEINVDDECDIDFIPPSPADS
SLSSPPVLRGIWGSTAQSTMSPQLWSVMMEICDLVDRIPVSELHRLSCGKDLEKKRDIRK
HLLSNFSGHKTSAMESPALSSYPRMSFAMEDPELSPYPTMSSTKTKNYIQNSVNMPAADS
TSHRLLGNVFKFKSFGASDKKIQDSSLDGSTKFGSQTELKASFSCASVDTPIKDSSSLQD
SVFFESKFNTPHNQKPVTTSTCARPSAPSPEDLGNEDLDFDIDNFDIDDFDDDIQCIDSP
VAPSAGKAVPSAYPAIREAPPVTKSNFSAVSVKTPNTSQNSGLSDSLLKPPIDNSAHEKF
RGFNFPHSKEMMKIFHKKFGLHRFRTNQLEAINATLCEEDCFILMPTGGGKSLCYQLPAC
LSPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDAEASSIYLQLSKKDPIIKLLY
VTPEKVCASNRLITAMENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRLNMLRQKYPSA
LMMALTATANPRVQKDILNQLKMTKPQIFSMSFNRDNLKYEVLPKKPKKVAQDCVEWIKK
HHPNDSGIIYCLSRHECDTTAETLQREGLAALAYHAGLSNPNRDYVQQQWINQDGCQVIC
ATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEMSHCLLFYSYSDVTRIRRL
IQMEKDGNRHTKQTHFNNLYSMIHYCENVLDCRRMQLLAYFGETTFNPKFCKENPRVACD
NCCRTTQYKSRDVTEDVKSLVRFVQEHCSSGYGKGKNSGNRLTLNMMVDIFLGSKSAKVQ
TGIFGKGAAYSRHNAERLFRKLILDRILDEELYITANDQAVAYMKTGERAQAVLNGFTKV
EFQDTENASSLRKQKASVTAATSQREEMVKKCQAELTDLCKRLGKIFGVHYFNIFNTATI
RRIAESLSAEPDVLLQIDGVTEDKLEKYGAELIDVLQKYSEWTLPADDTAQKSSAKASHN
TGNYDSDEEDGTSTSSYFRGNKEKNGTKRKTAPYFRKSKKRKTGGEGQQNRAKGGNNSKS
SRSNATSKTFSEYSNDCSSVSRPSAVKRPGFMAPPMPQNNRRFLKPSFTFL
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttacctcaaaacaatcttcagaagcagttagaattattttctgcaaaggtt
gttgggaacaagctctctcttcaaaagtctaagcccagtgtgtttacttttaaaaagaaa
agtccttcggatgggtcagcagtaaagaacttcagtcatacaaatcagcaagtaccacta
aaggataaaaatgtaaatgttgccctaaaacagtcctcactaaagcacttaatagcacct
tcgaaagctaaagagacaagtaagctcaatatattgtttacacctgttcctgtaaaacct
ccagagccttctccactactacatcctgcaaaaccttgccagaaaaactcaaatggaaaa
aatgagacaagtaaaggcaatggattctttacacctgtttgtgctaaaccaccagagcct
tctccaccactgcatccaacaagaactgtccagcaaagtgctaatgggaaaagtgagacg
atcaggcaagtggactctcttcccaagaaaaccggctgcaatacatctatcagctccact
ctcagcctggaggaatgggatgatattaatgattttgacacatctgtatctccacctaag
agccaaattaagaaattatgtaaaacaccagagaaatgcaacaagaggcccagtgtgaca
tctccgaaatctcagactcttcaagtgacatctgttaataaagagactgtgaaaaactgt
gtagaaaaatggcctgatctggttcctatttccagttgtacagagactgcaaatccgtct
ttagataaaagctcaaatgataccgatgtggtggtctgtgacgaagtgagtgagccggaa
gaaataaatgtagatgatgagtgtgatattgattttattcccccgtcccctgcagatagt
agcctatcttctcctccagtgctcagaggaatctggggctctacagctcagagtaccatg
tcccctcagctctggtctgtgatgatggagatctgtgatctagtggacaggattcctgtg
tctgagctgcatcggctatcatgcgggaaggatcttgagaagaagagggacataaggaag
catcttttgtcaaatttctcagggcacaagacttctgctatggaaagccctgcattgtca
tcttatcctagaatgtcttttgctatggaagatcctgaattgtcaccatatcctacaatg
tcttctactaaaacaaaaaattacatacaaaactctgtaaatatgcctgctgcagactct
acctctcatcgactgttagggaatgtgtttaaattcaagtcattcggtgcctctgataag
aagatccaagacagttctctggatggtagcaccaaatttgggagccagacagaattaaaa
gcatcattttcctgtgcatcagttgatacaccaataaaggactcatccagtctccaggat
tctgtgttctttgagagcaaatttaacacaccacacaaccagaaaccagtcaccactagt
acttgtgctagaccatctgctccttctccagaggacttgggcaatgaggacctggacttt
gatatagacaattttgacattgacgactttgatgatgatattcagtgcattgatagccca
gtagcaccatctgctggcaaagctgttccatcagcatatcctgcaatacgggaagcacca
ccagttaccaagagtaacttcagcgcagtctctgtaaaaactcctaacaccagtcaaaac
tctggcctatcagattcactgttaaagccaccaatagacaactccgctcatgaaaaattt
cggggcttcaactttcctcactctaaagagatgatgaagattttccacaaaaagtttggg
ctgcatcgtttccgtaccaaccagctagaagccatcaatgccaccctgtgtgaggaggat
tgcttcattctcatgccaacaggtggtggaaagagtttgtgttaccagcttccagcctgt
ctctcccctggagttactattgtgatctctcctcttcgttccttgatagtggatcaagtg
cagaagctgacatctctggatattcctgccacttatcttactggtgataagacagacgca
gaagcctccagcatttacctgcagctttccaaaaaagatccaattataaaacttctctat
gttactccagaaaaggtctgtgcaagtaataggcttatcaccgctatggaaaacctttat
gagcgcaaattgttggcacggtttgtcattgatgaggctcactgtgtcagtcagtggggt
catgatttccgccctgactacaagcgactaaacatgttgcgtcagaagtacccttctgca
ctaatgatggcgctcacagcaactgcgaatccccgtgtccagaaggacattctaaatcaa
ctgaaaatgacaaaaccccagatattttcaatgagttttaacagggacaacctgaagtac
gaagtgttgccgaaaaaacccaaaaaggtggcccaggactgtgtggagtggattaagaag
catcacccaaatgactctgggatcatttactgcctgtcacgacacgagtgcgatactacg
gctgagactctccagcgggagggattggcagctctggcttaccatgctgggctcagtaac
cctaaccgagactatgtacaacagcaatggataaatcaggatggatgccaggtaatctgt
gctacaatagcattcggaatgggcatcgacaagccagatgtgagatacgtcattcatgcc
tctctgcctaaatctgtggaaggatattaccaagagtctggcagggctggtcgagatgga
gagatgtcacattgtctgcttttctacagctacagcgatgtgaccagaatccgaaggctt
atacagatggagaaagatgggaacaggcatacgaaacagacgcactttaacaacctgtac
agcatgatacattactgtgagaatgtcctggattgccgccggatgcaacttcttgcttac
tttggagagactacatttaatcctaaattctgcaaagagaaccccagggtggcatgtgac
aactgctgcaggacaacgcaatacaaatctagagatgtgacagaggatgtgaagagttta
gtaagatttgtccaagaacattgctcttctggttatgggaaaggaaaaaattctggtaac
cgcctaacactcaatatgatggtggatatatttctaggcagtaaatctgcaaaggtccag
actggtatatttggaaagggagcagcttattcacggcacaatgcagagcgattattccgg
aaactgattctggaccgaatcttggatgaagagttatatattacagccaatgaccaggct
gtggcttatatgaagactggagagcgagcccaagctgttttaaatggattcacaaaggtt
gagttccaggacacagagaatgccagcagtctccggaagcaaaaggcatctgttacggca
gctacatctcagagggaggaaatggttaagaaatgccaggccgagttgactgacctctgc
aaacgcctgggcaaaatatttggtgtacattactttaatatatttaacacagcaaccata
agaaggatagcagagtctctgtctgcagaaccggacgttttactccagattgatggagtc
acagaagataaattggagaaatatggagcagagctaatagatgttctccagaaatattca
gaatggactctgccagctgatgatactgcccagaagtccagtgcaaaggccagccataat
acagggaactatgacagtgatgaggaagatggcacttctacatcctcttattttagagga
aacaaagagaagaatggtacaaagcgtaagactgctccctacttccgtaaatccaagaaa
cggaaaactggtggagaaggtcagcagaaccgtgccaaaggtggcaacaattcaaaatct
tccagaagcaatgcaaccagtaaaacattttcagagtatagtaatgattgcagcagtgta
tcaaggccatcggcggtgaaaagacctgggttcatggctccgcccatgcctcagaacaac
cgccgctttctgaaaccctcattcacattcctttaa
DBGET
integrated database retrieval system
