Nanorana parkeri (Xizang Plateau frog): 108793712
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Entry
108793712 CDS
T04897
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108793712 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108793712 (EXOSC9)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108793712 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
hSH3
Motif
Other DBs
NCBI-GeneID:
108793712
NCBI-ProteinID:
XP_018420236
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MRETPLSNCERAFLLQAISERKRLDGRETYDYRNIKITFGTEYGCCIVELGKTRVLGQVS
CELVAPKMNRPTEGILFFNLELTAMASPAFEPGRPSELVVKLNRLLERCLRNSKCIDTES
LCVQAGEKVWQVRVDLHLLNHEGNIIDAASIAAIAALCHFRRPDVSVQGEEVTVYSLEER
DPVPLSIHHMPICTSFAFFQQGTYLLVDPSEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKEQVLRCSKIAGVKVGEITELIQKALENDRKARKEGGKFGFAESLPDQKITALKMEK
IPVDTNNVEDTAEEIISKSDPPSDVIAKPVVWAAGTAQIGEGAGNAWGELEESEEDEDEH
DVEDNDLSESHPVTAGTARKTSKNDVFMVSDSEEEEVIILKPAAQSKNRYHAISDMLIN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagggagacgccactgtccaactgcgagagagccttcctgctccaggcgatcagtgag
agaaagcgtcttgatggcagagagacctacgattacaggaatattaaaataacttttgga
acagagtatggctgctgtattgttgagcttgggaaaaccagagttcttggacaggtttcc
tgtgaacttgtggctcccaagatgaaccgccccactgaaggaattctttttttcaatctt
gagctcacagccatggcatctccagcatttgagccaggaagaccatcggaactagtggta
aaacttaacagactgctggaacggtgtctcaggaattccaagtgtattgacactgagtca
ctttgtgttcaggcaggagagaaggtgtggcaggttcgagttgatctacatttactgaat
catgaaggtaacataattgatgcagcaagcatagcggctattgcagcactttgtcacttc
cgaaggccagacgtatctgttcaaggagaagaggtcactgtgtactctctagaagaacgg
gaccctgttccgctgagcatccatcacatgcccatttgtaccagctttgccttcttccaa
caaggcacatatttgttggtggatcccagtgaacgagaggaacgggttatggatggactt
ctggtgatcgcaatgaacaagcacagagagatttgtactatccagtcaagtgggggaatc
atgctgctaaaagaacaggttctgagatgcagcaaaatagccggtgtgaaggtgggtgag
attacagaactgattcagaaagctttggagaatgaccgaaaggccaggaaagagggaggc
aaatttggctttgcagaatctcttccagaccagaaaataactgctttaaagatggaaaaa
atccctgtagatacaaacaatgtggaggataccgctgaggagataatttctaaatcggat
ccaccatcagatgtcattgcaaagcctgttgtttgggctgctggcactgctcaaattgga
gagggtgctggaaatgcatggggagagttggaggaatcggaagaagatgaggatgaacat
gatgtggaagataacgatttgtcagagagtcacccagtcactgcagggactgcaaggaaa
acttcaaaaaatgatgttttcatggtgtctgacagtgaggaggaagaagtgattatattg
aaacctgcggcacaatcaaaaaacaggtatcatgccataagtgacatgttgattaattaa
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