Nanorana parkeri (Xizang Plateau frog): 108799058
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Entry
108799058 CDS
T04897
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108799058 (SOX6)
Transcription factors [BR:
npr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108799058 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108799058
NCBI-ProteinID:
XP_018426378
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSGSRISTGCRRFLFQSHILWTDHNNVTEIKLQGQRRERDRMQSAEGPIRYQHASQTSRH
WELCGAIHGRYGGKQLYAAQLASMQVSPGAKMPSTPQPPNSTGAPSPTPVKSEKRGSSPI
TQVKDEAAQPLNLSARPKTAEPVKSPTSPTQNFFPPSKTSPVSLSSKSGIPSPISGALGR
GSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREHHQPHGIDGKNNLGLNNLGLN
NCRSDKMLFDAVTGRMCVRSLHAERTHYDNMGPQLMGKPNEEGKMGPGVIDLTRPEDADG
GTTVVEARVYRDSRGRSTNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR
WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRR
QEMRQFFTVGQQPQIPISSAAAAAVYPGAISMANTAPSPQMTSDCSSTSASPEPSIPVIQ
STYGMKMDSGSLTGNDLMNGEDEIEMYDDVYDEEPKSDYS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagccgtatatccaccggatgccgcagattcctcttccagtcgcacatattg
tggacagaccataataatgtgacagagatcaaacttcaggggcagcgcagagaacgcgac
agaatgcaaagtgctgaggggccaatcaggtatcagcatgccagtcagacctcaaggcac
tgggagctctgcggggccatccatggtcgctatggcgggaagcaactctatgccgctcag
ctcgccagcatgcaggtctctcccggagccaagatgccctccacgccacagccccccaat
tccacaggagccccgtcgcccacgcccgtcaagagcgagaagagggggagcagccccatc
acacaggtcaaggacgaggccgcccagccgctcaacttgtcggcgcgaccgaagacggcc
gagcccgtgaagtcgcccacctctcccactcagaacttcttcccgcccagcaagaccagc
ccggtgagcctctccagcaagagcggcattcccagcccaatcagcggagccctgggccgg
gggtcctccttagatatcctgtccagtctgaactctccggcgctgtttggggaccaggac
acggtcatgaaggccatacaagaggcgcggaagatgagagaacagatccagcgggagcat
caccaaccccacggcatagatgggaagaacaatctgggactgaacaatctgggactgaac
aactgccgaagtgacaagatgctgtttgacgccgtcacaggaaggatgtgcgttaggagt
ttacacgcagagaggacacactatgacaatatgggcccacagctgatggggaagccaaac
gaagaaggaaaaatggggcccggcgtcatcgatctgacaaggccagaggatgcagacggg
ggcaccacggtggtggaggcgcgagtgtacagagattctcgggggaggagtaccaatgag
ccgcacatcaagcgaccaatgaacgctttcatggtttgggcgaaagacgagcggaggaaa
atcctgcaagcctttcccgacatgcacaactccaacatcagcaaaatcctgggttcccgc
tggaaatccatgtccaaccaagagaaacagccatactacgaagaacaagctcgcctcagc
aagatccacctagagaagtatcccaactacaagtacaagccccggcccaagcgcacgtgc
atcgtggatggcaagaagctccgtattggggagtacaaacagctgatgaggtcgaggaga
caggagatgaggcaattcttcactgtcgggcaacagccccagatccccataagctccgca
gcggcggcggcggtgtacccgggtgcgatcagcatggcgaacaccgcgccgtcgccacag
atgacatcggactgctccagcacttcggccagccccgaacccagcatccccgtcatacag
agcacctacggcatgaagatggacagcggcagcctcaccggcaacgatctgatgaacgga
gaggacgagatcgagatgtacgacgacgtatacgacgaggagcccaaatcggactacagc
taa
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