KEGG   Nanorana parkeri (Xizang Plateau frog): 108804851
Entry
108804851         CDS       T04897                                 
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510  Focal adhesion
npr04512  ECM-receptor interaction
npr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:npr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108804851 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108804851 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108804851 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:npr00535]
    108804851 (COL9A2)
Proteoglycans [BR:npr00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   108804851 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108804851
NCBI-ProteinID: XP_018432260
LinkDB
Position
Unknown
AA seq 682 aa
MVSLQLSVILQLTCLSLAQFRGPPGPPGSPGPPGPSGIPGSDGIDGDRGPPGIGPAGAKG
EPGPPGPDGPPGESGIDGLIGAKGDPGPSGRLGVKGQPGLPGPPGKPGPGVAGLPGSPGQ
VGLPGEIGVTGAKGERGPAGPGGPPGLPGKPGPSGNIQGLEGSADFLCPTNCPAGPKGPQ
GLQGVKGHKGRPGPLGESGPQGKTGTKGDVGISGEQGIPGPTGPLGIRGYPGLAGSKGET
GPTGYKGMIGSVGAAGKPGEEGPKGPPGEPGEKGDKGSRGVIGQMGAMGPKGNNGLPGID
GKDGTPGVNGVKGSPGQNGIPGSTGHQGLAGLPGQPGTKGGIGQKGEPGSRGEPGFSGAP
GKQGERGPPGEIGPRGIVGIKGDRGERGQVGPVGVQGKVGVKGEQGPPGIPGPQGIPGVK
GDKGFLGKVGGKGDVGDPGVEGLAGEQGEKGDSGEPGPKGQQGVHGELGYSGPTGDPGQA
GVQGLAGLPGPRGLSGERGVPGMPGRPGVPGRDAGDQHIIDVVLKMLQEQLAEVAVSAKR
AALGGAGTMGPPGPPGPPGSPGEQGPHGHHGPRGIPGIVGVMGQIGNTGPKGKRGEKGDR
GETGRGHQGMPGPPGIPGLPGIPGHAIDGKDGERGPEGSAGEGGRPGLPGPAGLPGFCEA
AACLAASAYAPASLTEPGTVKG
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggtcagcctgcagctctctgtgatcctacagctcacctgcttgtccctggcacagttt
agaggtcctccaggtccaccagggtctcccggtccaccaggcccatcagggatcccagga
tcagatggcatagatggtgatagagggcctccaggaattggtcctgcgggtgcaaaagga
gaaccaggccctcctggaccagatggtcctcctggtgaatctggaattgatggattaata
ggagccaagggagatccaggaccttcaggacgactaggtgtcaaaggtcaaccaggactg
ccagggcctccaggaaagccaggtcctggtgtcgctggacttcctggtagcccaggccaa
gttggacttcctggagaaattggagtcacaggagcaaagggtgagagaggacccgctggg
cctggtggaccacctggactacctggaaaacctggcccctcggggaacatacaaggccta
gaaggcagtgctgatttcctgtgtccaacaaactgtccagctggccctaagggacctcaa
ggactgcagggagtaaagggccataaagggcgtccaggtcctcttggcgagtcgggacca
caaggcaaaacaggcacaaaaggagatgtaggcatttcaggggaacaaggaattccagga
cctacgggccctttgggaattcgtggttacccagggctcgctggatccaaaggagaaact
ggaccaacaggatataaagggatgattggatcagtgggtgcagcaggcaaacctggtgag
gaggggccaaaagggccccctggagagccgggagaaaaaggagataaagggtcccgaggt
gtcattggacaaatgggagcaatgggtcctaagggaaacaatggtctccctggtattgat
ggaaaagatggaactcctggtgttaatggagtaaagggcagccctgggcaaaatggcatc
cctggttcaactggtcatcaaggcttagctgggttaccaggacaaccaggcaccaaagga
ggtattggtcaaaagggtgaaccaggttcacgtggagagcctggattctctggagctcca
ggaaaacagggagagagaggtccacccggagaaattggccccaggggtattgtaggcata
aaaggggatcgtggtgaaagaggacaggttggaccagttggtgttcaaggaaaagtggga
gtaaagggtgagcaaggacctcctggaataccaggaccacagggtattcctggagtaaaa
ggagacaagggtttcctgggaaaagttggaggaaagggtgacgtgggtgacccaggagtt
gaaggtttggctggagagcaaggagaaaagggggattctggtgagccaggtcctaaaggc
cagcaaggtgtacatggagaactgggctactcaggtccaaccggagatcctggccaggct
ggagtacaaggactagcaggactacctgggccaagaggtcttagtggagagaggggagtc
cctggaatgccaggacgaccaggagttccaggcagagatgctggagatcaacacattatt
gatgtggttctgaaaatgttgcaagagcaactagcagaggtggccgttagtgctaagaga
gctgccctaggaggtgctggcaccatgggaccacctggacctccgggaccaccaggatca
cctggagagcaagggccacatggacaccatggaccacgtggcatccctggaattgtggga
gtgatgggtcaaattggcaacacaggacctaaaggaaaaagaggagaaaagggagaccgt
ggcgagacaggacgtggtcaccagggtatgcctggaccccctggcattccaggtctacct
ggcattcctggccacgccattgatggaaaagacggagaaagaggtccagagggatctgca
ggagagggtggcagacctggtttgcctggtccagcaggtctcccaggattttgtgaggca
gcagcatgtttggcagcatctgcatatgctccagcctctctgactgaacccggtaccgtc
aaaggttaa

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