Nanorana parkeri (Xizang Plateau frog): 108804851
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Entry
108804851 CDS
T04897
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510
Focal adhesion
npr04512
ECM-receptor interaction
npr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108804851 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108804851 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108804851 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
npr00535
]
108804851 (COL9A2)
Proteoglycans [BR:
npr00535
]
Extracellular matrix (ECM) proteoglycans
Others
108804851 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108804851
NCBI-ProteinID:
XP_018432260
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MVSLQLSVILQLTCLSLAQFRGPPGPPGSPGPPGPSGIPGSDGIDGDRGPPGIGPAGAKG
EPGPPGPDGPPGESGIDGLIGAKGDPGPSGRLGVKGQPGLPGPPGKPGPGVAGLPGSPGQ
VGLPGEIGVTGAKGERGPAGPGGPPGLPGKPGPSGNIQGLEGSADFLCPTNCPAGPKGPQ
GLQGVKGHKGRPGPLGESGPQGKTGTKGDVGISGEQGIPGPTGPLGIRGYPGLAGSKGET
GPTGYKGMIGSVGAAGKPGEEGPKGPPGEPGEKGDKGSRGVIGQMGAMGPKGNNGLPGID
GKDGTPGVNGVKGSPGQNGIPGSTGHQGLAGLPGQPGTKGGIGQKGEPGSRGEPGFSGAP
GKQGERGPPGEIGPRGIVGIKGDRGERGQVGPVGVQGKVGVKGEQGPPGIPGPQGIPGVK
GDKGFLGKVGGKGDVGDPGVEGLAGEQGEKGDSGEPGPKGQQGVHGELGYSGPTGDPGQA
GVQGLAGLPGPRGLSGERGVPGMPGRPGVPGRDAGDQHIIDVVLKMLQEQLAEVAVSAKR
AALGGAGTMGPPGPPGPPGSPGEQGPHGHHGPRGIPGIVGVMGQIGNTGPKGKRGEKGDR
GETGRGHQGMPGPPGIPGLPGIPGHAIDGKDGERGPEGSAGEGGRPGLPGPAGLPGFCEA
AACLAASAYAPASLTEPGTVKG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcctgcagctctctgtgatcctacagctcacctgcttgtccctggcacagttt
agaggtcctccaggtccaccagggtctcccggtccaccaggcccatcagggatcccagga
tcagatggcatagatggtgatagagggcctccaggaattggtcctgcgggtgcaaaagga
gaaccaggccctcctggaccagatggtcctcctggtgaatctggaattgatggattaata
ggagccaagggagatccaggaccttcaggacgactaggtgtcaaaggtcaaccaggactg
ccagggcctccaggaaagccaggtcctggtgtcgctggacttcctggtagcccaggccaa
gttggacttcctggagaaattggagtcacaggagcaaagggtgagagaggacccgctggg
cctggtggaccacctggactacctggaaaacctggcccctcggggaacatacaaggccta
gaaggcagtgctgatttcctgtgtccaacaaactgtccagctggccctaagggacctcaa
ggactgcagggagtaaagggccataaagggcgtccaggtcctcttggcgagtcgggacca
caaggcaaaacaggcacaaaaggagatgtaggcatttcaggggaacaaggaattccagga
cctacgggccctttgggaattcgtggttacccagggctcgctggatccaaaggagaaact
ggaccaacaggatataaagggatgattggatcagtgggtgcagcaggcaaacctggtgag
gaggggccaaaagggccccctggagagccgggagaaaaaggagataaagggtcccgaggt
gtcattggacaaatgggagcaatgggtcctaagggaaacaatggtctccctggtattgat
ggaaaagatggaactcctggtgttaatggagtaaagggcagccctgggcaaaatggcatc
cctggttcaactggtcatcaaggcttagctgggttaccaggacaaccaggcaccaaagga
ggtattggtcaaaagggtgaaccaggttcacgtggagagcctggattctctggagctcca
ggaaaacagggagagagaggtccacccggagaaattggccccaggggtattgtaggcata
aaaggggatcgtggtgaaagaggacaggttggaccagttggtgttcaaggaaaagtggga
gtaaagggtgagcaaggacctcctggaataccaggaccacagggtattcctggagtaaaa
ggagacaagggtttcctgggaaaagttggaggaaagggtgacgtgggtgacccaggagtt
gaaggtttggctggagagcaaggagaaaagggggattctggtgagccaggtcctaaaggc
cagcaaggtgtacatggagaactgggctactcaggtccaaccggagatcctggccaggct
ggagtacaaggactagcaggactacctgggccaagaggtcttagtggagagaggggagtc
cctggaatgccaggacgaccaggagttccaggcagagatgctggagatcaacacattatt
gatgtggttctgaaaatgttgcaagagcaactagcagaggtggccgttagtgctaagaga
gctgccctaggaggtgctggcaccatgggaccacctggacctccgggaccaccaggatca
cctggagagcaagggccacatggacaccatggaccacgtggcatccctggaattgtggga
gtgatgggtcaaattggcaacacaggacctaaaggaaaaagaggagaaaagggagaccgt
ggcgagacaggacgtggtcaccagggtatgcctggaccccctggcattccaggtctacct
ggcattcctggccacgccattgatggaaaagacggagaaagaggtccagagggatctgca
ggagagggtggcagacctggtttgcctggtccagcaggtctcccaggattttgtgaggca
gcagcatgtttggcagcatctgcatatgctccagcctctctgactgaacccggtaccgtc
aaaggttaa
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