Neodiprion pinetum (white pine sawfly): 124215038
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Entry
124215038 CDS
T08966
Symbol
Atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124215038 (Atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npt03000
]
124215038 (Atf6)
Transcription factors [BR:
npt03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
124215038 (Atf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
YabA
bZIP_Maf
TSC22
Seadorna_VP6
DUF6262
Cnn_1N
DUF1796
Motif
Other DBs
NCBI-GeneID:
124215038
NCBI-ProteinID:
XP_046473871
LinkDB
All DBs
Position
3:28767736..28782398
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AA seq
806 aa
AA seq
DB search
MLIKEDPQWNNLMDLDFQMFPELGSLDGECLMAPDDDFLQALSSELEIPSLLGGEGSPSH
DETPDEIMKDAVLQDNLPILDELGVDPMQWGPDAFPNLSAAGLDIKNEVKDEIKTEPGSP
HSQLPPSPSPSNSDSSGSEWQNDNSTTSSTDFKCTLETPPISPPQNDSPPTSPKPGLNPS
LLQPIKLVSINSPNPANFVLSKGNSAKRVCIQPKLNTTLNVGEDAPRKTIVLSAQDFAAL
TQKVKQNNTGQPLKIQSVAPLKLPPNAQIKIQNPRNVQSTPQIKTESNTIKITSSSQVKI
LNSIPNVQIQNTEPLVSMPNGCTQIMIKNEPELMNLSGKQECEIKALKRQQRMIKNRESA
CLSRKKKKEYVTSLEKQIADLQDENAQLKMENIALRERLCATEEMTGTSKKLGSLNLGAN
RKNTAILLAMVFMVSLNVGSLGGLFSQNKRLDSMSNHLPVSVPNVRHGRSLLWTDIDKQD
SGEHKEQFNQTTSIHHPMCPMYINQTESIRLDSELRRWIGGDPDKDNWTKSSETDLGTNS
LGELLLSKPSLVRQRLNSKPKLPPQKKMEPKPKTDNIATSNSNAVEVFSPTLTEHASLFD
ALRRRDDTFYVVWFSGEHLLLPASRQNKTARPRMSLVLPAVPVNGTFSTPANHVTMMQID
CEVMNTQLLHLKESVIPEHLRRNQQSTDHTSKTDNDHVPTAANVTKTYKPYFVKENITAT
DFNDKNYKNPYMMKAEDAYHPKEPSYLLRSKFIPNFGLENSKDNSYDVKSQDDVKSEIFT
PSIDSSKTPYSQTGRKLRRRRNLLNP
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgttaataaaggaagacccgcagtggaacaatctcatggatctggattttcagatgttt
ccagagctcggcagcctcgatggggaatgtctaatggcgccagacgatgatttcctgcaa
gcactgagctcggaattggagataccttcacttttaggcggtgaaggatctccgagtcat
gatgaaactcccgatgaaataatgaaggacgcagtgttgcaggataacttgcctattctt
gacgaactcggagttgaccccatgcaatggggtccagatgcctttcctaatctttctgct
gctggtttggacataaagaatgaagtcaaagatgaaattaaaactgagccgggaagtcca
cattctcaactgccgccgtcgcccagtccaagcaattcagactcgagtgggtccgaatgg
caaaatgataattctactacttcatctacagactttaagtgtactttagaaacgccgcca
atatcaccaccacaaaacgattcacctccaacatctccaaagccaggtttgaacccctct
cttttacagccaattaaattggtttccataaacagtcccaatcctgcaaatttcgtatta
tccaaaggaaattctgcaaagagagtttgcattcagccaaagctgaatacgacactgaat
gtcggagaagatgcgcctaggaaaacaatagttcttagtgctcaagatttcgctgctctt
acgcagaaggtaaagcaaaacaatactggccagccattaaaaatccaatctgtagcacca
ctgaagctaccgccaaatgcacagataaaaattcagaatcctagaaatgttcaatccaca
ccacaaataaaaacggaatcaaatacaattaaaatcacatcatcgagtcaagttaaaatc
ctaaattcaattccaaatgtccaaattcaaaataccgagccgcttgtttccatgcctaat
ggttgcacacagataatgataaaaaatgaaccagagctgatgaatttgagtggcaaacaa
gaatgtgaaataaaagcattaaaaaggcaacaaagaatgataaaaaatcgagaatctgct
tgtttgtcacggaaaaagaagaaagaatatgtgacttcattggaaaaacaaattgcagat
ttgcaggatgaaaatgcacagttgaaaatggaaaatattgcattgagagaaagattgtgt
gccactgaggaaatgactggaacaagtaaaaaattaggaagcctaaatcttggagcgaac
agaaaaaatacagcaatcttacttgccatggtttttatggtttctttgaatgttggaagc
ttagggggattattttcacaaaacaaacgactagattcaatgtcgaatcacttacccgtc
tccgtgcctaatgttagacatggcagatcactgctttggacagacatagataagcaggat
agtggagaacataaggaacagtttaatcaaacaacatctatccaccacccaatgtgtcct
atgtatattaatcaaacagaatctatcagactggatagtgaactgagacgttggattgga
ggagacccggataaggataactggaccaaatcatccgaaacagatttaggaactaattct
ttgggagaattacttttgtcaaaaccgtcacttgtaagacaacggttgaacagcaaaccg
aaattaccccctcagaaaaagatggagccaaaaccaaagaccgacaatattgccacatcg
aatagcaatgctgttgaagtgttttcaccgactcttacagaacatgcttcgttgtttgat
gctttgagaagacgcgacgacactttttatgtcgtctggtttagtggtgaacatttactc
ttacctgcgtcaagacaaaacaaaacagcaaggcctagaatgtcccttgttctacctgct
gtacctgttaacggtacattttccactcctgctaatcacgtgaccatgatgcaaatagat
tgcgaggtaatgaatacacagttgctacacttgaaggagtctgttattcccgagcatctg
cgtcgcaaccagcaatctacagatcatacctctaaaactgataatgatcatgtgccgaca
gctgcaaatgttacgaaaacttataaaccctattttgttaaagaaaatattacggcgacc
gattttaatgataaaaattataaaaatccttacatgatgaaagctgaggatgcttatcat
cctaaagaaccatcatacttacttcgaagcaagtttataccaaattttggcctagaaaac
tcaaaagataattcttatgatgtgaaatctcaagatgacgtaaaatcagaaattttcact
cctagtattgatagttcaaagacgccgtattctcaaacaggcagaaaattgagacggaga
cgaaatctactaaatccttga
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