Neodiprion pinetum (white pine sawfly): 124221400
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Entry
124221400 CDS
T08966
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124221400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npt03400
]
124221400
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124221400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
124221400
NCBI-ProteinID:
XP_046487324
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Position
1:complement(23168034..23172797)
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AA seq
740 aa
AA seq
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MMRSSAPSQKGKRPGEFSPLQPRSTIPQREKRLKTELKEIKISRKPLVQLPIAVTPESLS
EHEERIRKLLNRPFKIPIPGYQLSNRSLGMRMLGPRTPLHDPDEANALVVYTPPELSEHD
KLKLDTTKQLVHVVVDPALCNILRPHQREGVKFMYECVTGKRIENAYGCIMADEMGLGKT
LQCITLLWTLLKQGPEAKPLIEKAVIVAPSSLVKNWYNEIHKWLGRRVNPLAIDGGSKTD
IDNKLKGFMKTYGRRCANPILIISYETFRLHAHVLHQDDVGLVLCDEGHRLKNSENQTYQ
ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKFEIPILKGQDAGAT
DSERQRAQECLQELVTIVNKCLIRRTSALLSKYLPVKHEMVICVKLNKLQTQLYQNFIKS
DSIRKSMQGDEFGTGKKGSLSALSAITLLKKLCNHPDLVYEKILEKSEGFENAAELLPPN
YSLKDVLPELSGKLMVLDCLLALVKSTTTDKVVLVSNYTQTLDLFEKLCRKRTYRYVRLD
GSMTIKKRSKVVDSFNDPNSGDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM
ARVWRDGQKKPCFIYRLLCTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHFTLSDLRDL
FTLEENTTSDTHSKFKCKRCVNGVEVRGPPEGTDCNSDLSDWRHANNPRHLPDLPLRQCW
ASGISFVFHHRSHELVKAEE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatcaagcgctccaagccaaaaaggcaaacgacctggagagttttctcctctc
cagccacgctccaccataccacaaagagagaaacggttgaagaccgagttgaaagaaatt
aaaatctcacgtaagccactcgtacaactgccaattgccgttactccagaatcattatcc
gaacatgaggagagaatacgaaagttattgaaccggccgtttaaaattccaattcctggt
tatcaactctctaacagatctcttggtatgcgtatgttgggacctcgaacaccgctccac
gatcctgatgaggctaatgcattggttgtttacacaccacctgaattatctgaacacgac
aaactgaaactagacacgaccaaacaacttgttcacgtagtagttgacccagctctgtgt
aatatattgcgacctcatcaaagagaaggtgttaaatttatgtatgagtgtgtaaccggg
aaacggatcgaaaatgcttatggctgtataatggctgatgaaatgggtcttggtaagact
ctgcagtgtattacattgttgtggactttgctgaaacaaggaccagaagctaaaccactt
attgaaaaagctgtgatagtggcgcctagttctctagtaaaaaattggtataacgaaata
cataagtggcttggcagacgagtgaatcccttggccattgatggtgggagtaaaacagac
attgacaacaaattaaaaggatttatgaagacctatggacgtagatgtgcaaacccaatt
ttgataatcagctatgaaacgtttcgtttgcacgctcacgttttacatcaggatgacgtt
ggtttagtattgtgtgatgaaggtcatcgtttgaaaaacagtgaaaatcaaacttatcag
gcacttatgggtttaaaagcaaaaagacgtgtattactcagtggaacacccattcaaaat
gacctactcgagtacttctcactggttcattttgtgaatcaaggacttcttggaactgcc
caggaattccgtcggaaatttgaaatcccgatcctgaaaggtcaagatgctggagcaact
gactcggagcgccaaagagcgcaagaatgtcttcaagagctggtaacaatagtaaacaaa
tgcttgataagacgtacaagtgcgctattgtcaaagtatttacctgtgaaacatgaaatg
gtcatttgcgttaaacttaacaaattgcaaactcagttgtatcaaaatttcatcaaaagc
gacagtatcagaaaatctatgcaaggtgatgaatttggcactggcaagaaaggtagtctt
tcagcattgtccgctattacactactcaaaaaactttgtaatcatcctgatctggtgtac
gaaaaaattctggaaaagtctgaaggattcgaaaatgctgcagaacttctacctccaaac
tatagtttaaaagatgtcttgccagagctgtctggtaaattgatggtcttggattgttta
ctggctttggtaaagtcaactacaacggataaggttgtgttggtatcaaattatacacag
accttggacttatttgaaaagttatgtcgaaagcgtacatatcgttatgttaggcttgat
ggatcgatgactataaaaaagagatccaaagtcgtagatagtttcaatgatccaaacagc
ggcgattttatattcatgctgagttctaaggcaggcggatgtgggcttaatttgattggc
gcaaaccgactagttatgtttgatcctgactggaatcccgccaacgatgaccaagctatg
gccagagtttggagagacggacaaaaaaagccttgcttcatttatcgcttgctttgtact
ggtacaatagaagaaaagatattccaaagacaggcccacaagaaagcattaagttcgact
gtagttgaccaagaagatgatgtggcgaggcactttactttaagcgacttgcgcgatcta
ttcacgttggaagaaaacaccacatctgatacccattcaaaattcaagtgcaagaggtgc
gtaaatggagtggaggttcgcggcccacccgaaggaacagactgcaattctgacttgtcg
gattggagacatgccaacaatcctcgtcatttacccgatctgccacttcggcagtgctgg
gctagtggcatatcctttgtattccatcatcggtcacacgaactcgttaaagccgaagaa
tga
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