Candidatus Nitrosymbiomonas proteolyticus: NPRO_16710
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Entry
NPRO_16710 CDS
T07108
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
npy
Candidatus Nitrosymbiomonas proteolyticus
Pathway
npy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NPRO_16710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npy03021
]
NPRO_16710
03400 DNA repair and recombination proteins [BR:
npy03400
]
NPRO_16710
Enzymes [BR:
npy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NPRO_16710
Transcription machinery [BR:
npy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NPRO_16710
DNA repair and recombination proteins [BR:
npy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NPRO_16710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Zn_ribbon_NOB1
HypA
Motif
Other DBs
NCBI-ProteinID:
BBO24076
UniProt:
A0A809S5D3
LinkDB
All DBs
Position
1825139..1829152
Genome browser
AA seq
1337 aa
AA seq
DB search
MTIIQPTSKRIGRFLEVPNLIELQLNSYRWFLEEGLPELFQTFSPIWDFTQSNFIELVSF
SLGEPKYSVDECRDRDMTFEAPIKAIVRFGGREREMIESEVYLGDLPLMTDRGTFIINGR
ERVIVSQLSRSPGLYFEEGVDTAMQMVISARVIPNEGPWLEIESDSNHIVRTQISQTKKL
PLTQLIKALGAFDKGTSTVHLPLKEAIHRKLVEPLADPETGEVLISADEWITQEAVDALP
AGIQEQSVNVHTPVDTTDDLIRVFGRYETLASPTADDLTGRRVSEDVLDADGKVVIKAMQ
RIEPETAKKIESLGLESLRTYTLPSVVEATLKEDPTSNWREAILDIYKRLRPGEAANEDA
AKQLIYGLFFDVKRYDLGKVGRRFLNNRLGFDVPIDRRCLTAVDLVGIMFKLQDYIDRKA
ERDDIDDLKNKRVRSVGELLQSQLRLGFVRMEKVARERMTSTDQENLLPGIILSVKPVSA
AIKSFFSSNQLSTFMDQTNPLSELTNKRRLSSLGPGGLQRTSAKLEVRDVHRSHYGRICP
IETPEGPNIGLISQLTTHARVDEYGFIMTPYRRVVDGRVTDEIVYLTAQEDFSRLIAPAD
TLTDGEGRIVADRLQVRCAGTEFGGASYPLVPRDRVTLMDVSPVQIVSVATALIPFLEND
DANRALMGANMQRQAVPCLRSERPVVCTGYERTAAVDSGAAVVARRGGVVVLATATEVRV
QTDSGEIDSYRLQHMLQSNKSTCFTQRPIIELGQRVLEGDPLADGPCVDHGELALGKNVL
VSFMPWGGYNYEDAIIISERLVKDDVFSSIHIERHETEAVDTKLGPEEITRDIPNVGEDA
LKDLDENGIVRIGAEVRPEDILVGKVAPKGQVEMTAEERLIIAIFGKKAEETRDVSLRLP
HGEKGTVVDVKVFSRFKYKCTACGHEYNESKKRERLFCDRCEEAINSLGADELPAGTNMS
VQVYIAQKRKLMVGDKMAGRHGNKGVISRVVPVEDMPCLMDGTPVDIILNPLGVPSRMNI
GQILETHLGYAGRKLGVRYRCPAFEGATEEEVLEEIERLAEAMRCEALSKYVNRELMLAV
EFEKDDSVETMKERVNGALRKLDRPRLERVSRILGATPVADEAELSAIDPDDWEPEEPQG
AGEPYSAPDAAYSDITERVLVNAFRRGGIDPETCKSLVRDGLTGDVLPNPLTVGTIYMLK
LEHLAEEKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLTIK
SDDVAGRVKAYEAIVKGEAIAEPGIPESFKILVNELRSLCLKVTVEDAANRELALRDLDE
LGPSDDARLARSVGLFS
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgacgattattcagcccacctcgaagcgaatcggcagattcctcgaggtccccaatctg
atcgaacttcaactcaacagttacagatggtttctcgaagaaggtctacccgagcttttc
cagacgttctcaccgatttgggatttcactcaatccaacttcatcgaactcgttagcttc
tcgctcggcgagccgaaatactcggttgacgagtgccgcgaccgcgatatgacgttcgag
gcgccgatcaaggcgatcgttcgctttggcggccgcgagcgggaaatgatcgagtccgag
gtctacctgggcgacctgcccctgatgaccgaccgcggaacgttcatcatcaacggtcgc
gaacgggtcattgtatctcagctttcccgttcgcccggactctacttcgaagaaggcgtt
gacacggccatgcagatggtcatcagcgctcgcgtgattcccaacgagggcccatggctc
gaaatcgagtcggactccaaccatatcgtccggactcaaatcagccaaacgaagaagctg
ccgctgacgcagttgatcaaagccttaggggcgttcgataagggaacttcgacggttcac
ctgcccctaaaggaagccattcaccgaaagctcgtcgagccgctcgccgacccggaaacc
ggtgaggtccttatcagcgcggacgagtggatcacccaggaggccgtagatgcgctgcct
gcggggattcaggagcagtctgtcaatgtccacacgcccgtcgataccaccgacgacctc
attcgggtgtttggaaggtacgagacgctggcatctccgacggctgacgaccttacggga
aggcgggtctcggaggacgtgctcgatgccgacggcaaggtcgtcatcaaagcgatgcag
cgaattgagccagaaacggccaagaagatcgagtcgctgggactggaatcgttgcgcacg
tacaccctgccgagcgtcgtcgaggccacgctcaaagaggacccgacttcgaactggcgc
gaggccatcctcgacatctacaagcggcttcgacccggtgaagctgccaacgaggacgct
gcgaagcaactcatctacgggctgttcttcgacgtgaagcgctatgacctgggcaaagtg
gggcgacggttcctcaacaacaggctcgggttcgacgtgccgatcgaccgacgctgcctc
acggccgtcgacttggtcgggatcatgttcaagctccaggactacatcgaccgcaaggcc
gaaagagacgacatcgacgacctcaagaacaagagggtccgttcggtaggcgagttgttg
cagagccagcttcggctgggatttgtgaggatggagaaggtcgctcgcgagcgcatgacc
agcaccgaccaggagaacctgctgcccggcattatcctctcggtcaaacctgtgagcgcg
gcgatcaagagcttctttagctccaatcagctcagcacgttcatggatcaaacgaatccg
ctgagcgagttgaccaacaagcggcgtctttcgagtctggggccggggggtctgcaacgg
acaagcgcaaagctcgaagttcgcgacgtccaccgttcgcactacggccggatctgcccc
atcgagacccccgaaggtccgaatatcgggctgatctcccagctcactacccacgcacgg
gtcgatgagtacgggttcatcatgactccttaccggcgcgtcgtcgatggccgcgtcacc
gacgagatcgtgtacctgaccgcccaggaggacttctcgaggctcattgcgcccgcagac
actctcaccgacggcgagggtcggatcgtcgcagaccggctgcaggtgcgctgcgcggga
acggagttcggaggcgcgagctatccgctcgtcccgagggaccgggtgaccctgatggac
gtctcgccggttcaaatcgtgtccgtcgcgacggccctgattcctttcctcgaaaacgac
gacgcgaaccgggcgcttatgggcgcgaacatgcagcgccaagctgtgccttgcctaaga
tcagagcggccagtcgtttgtacgggctacgagcgaacggcagccgtcgactccggcgcg
gcagtcgtcgcccggcgaggcggcgtcgtggtattggcgaccgcgaccgaagtgcgcgtc
cagaccgatagcggcgagatcgacagttacaggctgcagcacatgctgcaaagcaacaaa
tcgacctgctttacgcagcgacccatcatcgaactgggccagcgggtgctggaaggcgat
cccctcgcggacgggccttgcgtcgatcatggcgaactcgctttgggcaagaacgtgctg
gtctcgttcatgccttggggcggatacaactacgaagacgcgatcatcatcagcgagcgg
ctggtcaaggatgacgtgttcagttcgatccatatcgagcggcacgagacggaagccgtc
gacaccaagttgggtcctgaagagatcacgcgcgatattccgaacgtcggagaggacgcc
cttaaggacctcgacgagaacggcatcgtccgcatcggcgcggaagtcaggcccgaagac
atcctggtcggaaaggtcgcgcccaaggggcaggtcgaaatgaccgccgaagagcggctg
atcatcgcgatcttcggtaagaaggccgaagagacgagggacgtctcattgcggctgccg
cacggtgagaagggcacggtcgtcgatgtgaaggtctttagccggttcaagtacaagtgt
acggcttgcgggcatgaatacaacgagtcgaaaaagcgggaacgccttttctgcgaccgc
tgcgaagaagccatcaattcgctgggcgcggacgaacttcccgcaggaacgaatatgtcg
gtccaggtctatatcgcacagaagcggaagctgatggtcggcgacaaaatggccggacgg
cacgggaacaagggcgtcatctcgcgggtcgtgcccgtcgaagacatgccgtgcctgatg
gatggcacgccggtggacatcatcttgaacccgctcggcgttccgagccgtatgaacatc
ggccagattctggagacccacctcggttacgcgggccgaaagctcggagtgcggtatcgc
tgcccggccttcgaaggcgcgaccgaagaagaagtcttggaagagatcgagcgtttggcc
gaagcgatgcggtgcgaagccctatcgaagtacgtcaaccgggaactgatgctggccgtc
gagtttgaaaaggacgactcggtcgaaacgatgaaggagcgcgtcaacggcgccttgagg
aagttggataggccgcgcctcgagagagtgagccgcattctgggagcaaccccggttgcc
gatgaggccgaactgagcgcgatcgaccccgatgactgggagccggaagagccgcagggc
gcgggtgaaccgtactcggctccggacgctgcctacagcgacatcaccgagcgcgtgctc
gtcaatgccttccggcggggaggcatcgaccccgaaacctgcaagtcgttggttcgggac
gggctgaccggagacgtgctgcccaacccgctgaccgtagggacgatctacatgctcaag
ctcgagcaccttgcggaagagaaaattcacgcccgatcgatcgggccgtactcgctcgtc
acccagcagccattgggcggtaaggcgcagttcggcggccagagatttggcgagatggaa
gtgtgggcgctagaagcttacggagcggcctacacgctccaagagttgctcacgatcaag
tcagacgatgtcgccggacgcgtcaaggcatacgaggcgatcgtcaaaggcgaagccatc
gccgaacccggaattccggaatccttcaagattctggtgaacgagttgcgctcgctgtgc
ctcaaggtcacggtcgaagacgccgcgaaccgagaattggccctgcgcgacctggacgaa
ctcggtccgagcgacgacgcccgactcgcacgttcggtggggttgtttagctag
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integrated database retrieval system
