Novosphingobium resinovorum: BES08_14755
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Entry
BES08_14755 CDS
T04490
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nre
Novosphingobium resinovorum
Pathway
nre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BES08_14755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nre03021
]
BES08_14755
03400 DNA repair and recombination proteins [BR:
nre03400
]
BES08_14755
Enzymes [BR:
nre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BES08_14755
Transcription machinery [BR:
nre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BES08_14755
DNA repair and recombination proteins [BR:
nre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BES08_14755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
B
NQRA_2nd
Motif
Other DBs
NCBI-ProteinID:
AOR77870
UniProt:
A0A1D8A714
LinkDB
All DBs
Position
complement(3155301..3159467)
Genome browser
AA seq
1388 aa
AA seq
DB search
MATKPIDTTPLVRTAKKRIRKIFGDIHEVVQMPNLIEVQRESYEQFLRSDPSVGYVSGLE
KTLRSVFPIRDFAGTSELDFVHYELEDPKYDVTECRQRGITYAAPMKVTLRLIVFEVDAE
TETRSVLDIKEQDVYMGDMPLMTENGTFFINGTERVIVSQMHRSPGVLFDHDRGKTHASG
KFLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYALGLDGEQVLNHFYATM
SWKRGSGGWQLPYTPEAWRGAKPTFDIVDAKSGEVVFAAGTKISPRAANKAQKDGLEELL
LPTEEIFGRYSAKDLIDESTGRIYIEAGDEVTPENLDALDAAGFDQIDLLDIDEVNTGPW
IRNTMKADKAENRDMGLEAIYKVMRPGEPPTKETAEALFDGLFFDADRYDLSAVGRVKMN
MRLGLDAEDTVTTLRVEDILAVVKELVGLKDGKGEIDDIDNLGNRRVRSVGELLENQYRV
GLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTH
KRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFARVNKYGF
IETPYRKVLDGKVTKDVVYLSAMEEQKHTVAQASAELTGDGSFVEELVSARQNGEFVMSP
RDQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKADAPYVGTGMEE
TVARDSGAAISALRAGIVDQVDATRIVIRASGDIEAGKSGVDIYRLQKFERSNQSTCINQ
RPLVKVGELVETGTIIADGPSTEFGELALGRNVLVAFMPWNGYNYEDSILISERIVKDDV
FTSIHIDEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYVGAEVHPGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVSGTIVDVRVFNRHGIEVDDRTRA
IQNEEIERLAKDREDERAILNRATYNRLKDMLLGQVATSAPKGLKKGVDITDEVLAEVER
HEWWKFGVADDHVQSQLEAVKTQYDLTVKAIQEKFEDRKEKLERGDELAPGVLKMVKVFV
AVKRKLQPGDKMAGRHGNKGIISRILPLEDMPFLEDGTPVDFVMNPLGVPSRMNVGQIFE
THLGWAARGLGKRIGDALDAWRVANPNPVAGQPPEAVRELLTEIYGDNYAEDIATRTDDQ
IIEFADSVRKGVPMGSPVFDGAVEKDVTDMLRLAGLDESGQVDLFDGRTGDRFDRKVTVG
MKYVLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQ
EMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELTSHDDAEDD
DGVALAAE
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagcccatcgacaccaccccgctggtgcgcactgcaaagaagcgcatccgc
aagatcttcggcgacatccacgaagtcgtccagatgcccaacctgatcgaagtccagcgc
gagagctacgagcagttcctgcgctcggacccgtcggtcggctacgtctcgggcctcgaa
aagaccctgcgttcggtgttcccgatccgcgacttcgcgggcaccagcgagctggacttc
gtccactacgagctggaagaccccaagtacgacgtgaccgagtgccgccagcgcggcatc
acctacgccgcaccgatgaaggtcacgcttcgcctcatcgtgttcgaggtcgacgccgag
accgagacccgctcggtcctcgatatcaaggagcaggacgtctacatgggcgacatgccc
ctgatgacggagaacggcaccttcttcatcaacggcaccgagcgcgtcatcgtctcgcag
atgcaccgttcgccgggcgtcctgttcgaccatgaccgcggcaagacccacgcttcgggc
aagttcctcttcgccgcccgcgtgattccgtaccgcggttcgtggctcgacttcgagttc
gacgccaaggacatcgtcaacgtccgcatcgaccgcaagcgcaagctgcccgtcacctcg
ctgctctacgcgctgggtctcgacggcgagcaggtgctgaaccacttctacgccaccatg
tcgtggaagcgcggctcgggcggctggcagctgccctacactcccgaggcatggcgcggc
gcgaagccgaccttcgacatcgtcgatgcgaagtcgggcgaagtcgtgtttgccgccggc
accaagatctccccgcgcgccgcgaacaaggcgcagaaggacggtctggaagagctgctg
ctgccgaccgaggaaatcttcggccgctattccgccaaggacctgatcgacgagtcgacc
ggccgcatctacatcgaagccggtgatgaagtgacgccggaaaacctcgacgcgctcgac
gcggcgggcttcgaccagatcgacctgctcgacatcgacgaagtcaacaccggtccctgg
atccgcaacacgatgaaggccgacaaggccgagaatcgcgatatgggtctggaagcgatc
tacaaggtcatgcgtccgggcgagccgccgacgaaggaaaccgccgaagccctgttcgac
ggcctgttcttcgacgccgaccgctacgacctctcggccgttggccgcgtcaagatgaac
atgcgcctcggcctcgatgccgaggacaccgtcaccaccctgcgcgtcgaggatatcctc
gccgtggtgaaggagcttgtcggcctgaaggacggcaagggcgagatcgacgacatcgac
aacctcggcaaccgccgcgtgcgttcggtgggcgagttgctggaaaaccagtaccgcgtc
ggcctgctgcgcatggagcgcgccgtgaaggagcgcatgtcgtcggtggacgtgtcgacg
gtcatgccgaacgacctcatcaacgccaagcccgccgtggctgccgttcgcgagttcttc
ggttcctcgcagctctcgcagttcatggaccagaccaacccgctttcggaagtcacccac
aagcgccgtgtttcggccttgggcccgggcggtctgacccgtgagcgcgccggcttcgaa
gtccgcgacgttcacccgacccactacggccgcatctgcccgatcgaaacgccggaaggc
ccgaacatcggtctgatcaactcgctgtcgaccttcgcgcgcgtcaacaagtacggcttc
atcgagacgccgtaccgcaaggtgctcgacggcaaggtgaccaaggacgtcgtctacctc
tcggcgatggaagagcagaagcacaccgtcgcgcaggcttcggccgaactgaccggtgac
ggctcgttcgtcgaggaactcgtctcggctcgccagaacggcgaattcgtgatgagcccg
cgcgaccagatcacgctgatggacgtttcgcccaagcagctcgtctcggtcgccgcatcg
ctcatcccgttcctggaaaacgacgacgccaaccgcgctctcatgggctcgaacatgcag
cgtcaggccgtgccgctcgtgaaggccgatgcgccttacgtcggcaccggcatggaagag
accgtcgctcgtgactcgggcgccgcgatctcggccttgcgcgccggcatcgtcgaccag
gtcgatgcgacccgtatcgtcatccgcgcctcgggcgacatcgaagccggcaagtcgggc
gtcgacatctaccgcctgcagaagttcgagcgttccaaccagtcgacctgcatcaaccag
cgcccgctggtgaaggtgggcgagctggtcgagaccggcacgatcatcgccgacggcccg
tcgaccgagttcggcgagctggcgctgggccgcaacgtgctcgtcgcgttcatgccctgg
aacggctacaactacgaggactccatcctcatctccgagcgcatcgtgaaggacgacgtg
ttcacgtcgatccacatcgacgagttcgaggtgatggcccgcgacaccaagctgggtcct
gaagacatcacccgcgacatcccgaacgtcggcgaggaagccctgcgcaacctcgacgaa
gcgggcatcgtctacgtgggcgccgaggttcaccccggtgacatcctcgtcggcaagatc
accccgaagggcgaaagcccgatgacgccggaagaaaagctcctgcgcgccatcttcggt
gaaaaggcttcggacgtccgcgacacttcgctgcgtctgccgccgggcgtttcgggcacc
atcgtcgacgtgcgcgtcttcaaccgccacggcatcgaggtcgacgaccgtacccgcgcg
atccagaacgaggaaatcgaacgcctcgccaaggaccgcgaggacgagcgtgcgatcctc
aaccgcgccacctacaaccgtctgaaggacatgctcctcggccaggtcgccacctcggcg
cccaagggcctcaagaagggcgtggacatcaccgacgaggtgctggccgaagtcgagcgt
cacgagtggtggaagttcggcgttgccgacgaccacgtccagtcgcagctcgaagcggtc
aagacccagtacgacctcaccgtcaaggcgatccaggagaagttcgaggaccgcaaggaa
aagctggagcgcggcgacgagctggctccgggcgtcctgaagatggtcaaggtcttcgtc
gcggtgaagcgcaagctgcagccgggcgacaagatggccggccgtcacggcaacaagggt
atcatcagccgcatcctgccgctggaagacatgcccttcctggaagacggcacccccgtc
gacttcgtcatgaacccgctcggcgtgccttcgcgcatgaacgtgggccagatcttcgag
acgcaccttggctgggccgcacgcggtctgggcaagcgcatcggcgatgctctggacgca
tggcgcgtggccaaccccaacccggtcgcagggcagccgcccgaggccgttcgtgaactg
ctgaccgaaatctacggcgacaactacgccgaagacatcgcgacgcgcacggacgaccag
atcatcgagttcgccgactccgtccgcaagggcgtgccgatgggctcgccggtgttcgac
ggcgcggtcgagaaggacgtcaccgacatgctccgcctcgccgggctggacgagtcgggc
caggtggacctgttcgacggccgcaccggcgaccggttcgaccgcaaggtgaccgtgggc
atgaagtacgtgctcaagctgcaccaccttgtcgacgacaagatccacgcccgttcgatc
ggtccgtactcgctcgtcacccagcagccgctgggcggtaaggcgcagttcggcggccag
cgcttcggtgagatggaggtctgggctctccaggcctacggcgccgcatataccctgcag
gaaatgctgacggtgaagtcggacgacgtggtcggccgcaccaaggtctacgaagcgatc
gtcaagggcgacgacaccttcgaggccggcattcccgagagcttcaacgttctcgtcaag
gaaatgcgctcgctgggtctcaacgtcgagctgaccagccacgacgatgccgaagacgac
gacggcgtcgccctggcggcggagtaa
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