Novosphingobium rhizosphaerae: R9J51_04005
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Entry
R9J51_04005 CDS
T11371
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
Organism
nrz Novosphingobium rhizosphaerae
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GFIT
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NCBI-ProteinID:
XVN47304
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Position
872492..876772
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AA seq
1426 aa
AA seq
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MNDLTKFTNQLPKPETFDQIQIGLASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERILYFESYVVIEPGITPLERYQLLTEDELLDAQDEYGEDAFSAG
IGAEAVKHMLMDLDMVQEREDLLKELAETKSELKPKKIIKRLKVVESFIDSGNRPEWMIL
DVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMDRKGEPGEGMLLADMAEVHQALFA
GAVTMHTKIVARVPQTDENGKTYLKRYETTPGRMLIGECLPKSHTVPFELVNRLLTKKEI
ADVIDQVYRHTGQKETVLFADAIMSLGFRNAFKAGISFGKDDMIIPATKDAFVAETKELV
ADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVANAMMDEIRATPSDEHGREKPINSIYMM
SHSGARGSPTQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVVTVNDCGTERALEMRAIVQGGSTIASLGERILGRTLA
EDMIEAKTGKVICEKGTLLDEAAVARIEAAGVQSARIRSPLICEAPQGVCGTCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVNEQSHLESICDGTVHYRDIPTI
TDSRNRRLSLARNGEIVIMDTDGRERAMHRVPYGTHLLHENGATVAQGQRLAEWDPFTLP
VITEKPGIVRYQDLIDGRTLTEQVDEATGIAQRVVTENRAGGRAKKEDLRPRLTLLDDAS
GESARYMMAPGTTLSVEDGQEVQAGDVLARASREAAKTRDITGGLPRVAELFEARKPKDN
AIIAKISGRIEFIRDYKAKRKIAIIPEEGEPVEYLIPKSKVIDVQEGDYVKKGDNLISGS
PDPHDILEVLGVEALAEYLVAEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDGGDTTL
LPGEQVDLEEMNETNAKLPGGSRFAEGKPVLLGITKASLQTRSFISAASFQETTRVLTQA
AVEGKRDSLIGLKENVIVGRLIPAGTGAGMNRMRVAANSRDAALRAANRRLQEALIAPRT
AAEEHAAELAQGPEAAIGNDTLAAVEGETHGTDADAADYLIKGDED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgaccaaattcaccaaccagctgcccaagcccgaaacgttcgaccagatc
cagatcggcctggcctcgcccgagcgcatccgcagctggtccttcggcgaaatcaagaag
ccggaaacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcccgc
atcttcggccccgtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagtac
aagggcgtcgtctgcgaaaagtgcggcgtggaagtgaccgtgaccaaggtgcgccgcgag
cgcatgggccacatcgaactggccgccccggttgcgcacatctggttcctcaagtcgctg
ccctcgcgcatcggcctgctgctcgacatgcagctcaagcagctcgaacgcatcctctac
ttcgaaagctacgtggtcatcgagccgggcatcaccccgcttgaacgctaccagctgctg
accgaagacgaactgctcgatgcgcaggacgaatatggcgaagacgccttttcggccggc
atcggcgccgaggcagtcaagcacatgctcatggacctcgacatggtccaggagcgcgaa
gacctgctcaaggaactcgccgagaccaagtcggagctcaagcccaagaagatcatcaag
cgcctcaaggtggtggaatcgttcatcgattccggcaaccgcccggaatggatgatcctc
gacgtggtgccggtcattccgcccgaactgcgcccgctggtgccgctcgacggtggccgc
ttcgccacttcggacctgaacgacctctatcgccgcgtgatcaaccgcaacaaccggttg
aagcgcctgatcgagctgcgcgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtcgacgcgctgttcgacaatggccgccgtggccgcgtgatcaccggcgcc
aacaagcgtccgctcaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgc
cagaacctgcttggcaagcgcgtcgactattcgggccgttcggtcatcgtgaccgggccg
gaactcaagctgcaccagtgcgggttgcccaagaagatggcgctcgagctgttcaagccg
ttcatctacgcgcgtcttgacgccaagggtctgtcgatgaccctgaagcaggccaagaag
tgggtggaaaaggaacgcaaggaagtctgggacatcctggacgaggtgatccgcgaacac
ccggtcatgctcaaccgtgcgcccacgctgcaccgcctgggcatccaggccttcgaaccc
gtgctgatcgaaggcaaggcgatccagctgcacccgctcgtctgctcggccttcaacgcc
gacttcgacggggaccagatggccgtccacgtgccgctttcgctggaagcccagctcgaa
gcgcgcgtgctgatgatgtcgaccaacaacatcctctcgcccgccaacggcaagccgatc
atcgtgccttcgcaggacatggtgctgggcctctattacctgtcgatggatcgcaagggc
gagccgggcgaaggcatgctgctggccgacatggccgaagtgcaccaggcgctgttcgct
ggcgcggtcaccatgcacaccaagatcgtggcgcgcgtgccgcagaccgacgagaacggg
aagacctatctcaagcggtatgaaaccacgccgggccgcatgctgatcggcgagtgcctg
cccaagagccacacggtgcccttcgagctggtcaaccgcctgctcaccaagaaggaaatc
gccgacgtcatcgaccaggtctatcgccacaccggccagaaggagacggtccttttcgcc
gacgcgatcatgagcctgggcttccgcaacgcgttcaaggcgggcatctcgttcggcaag
gacgacatgatcatccccgccaccaaggacgctttcgtggccgagaccaaggaactggtc
gcggactatgagcagcagtaccaggacggcctgatcacccagcaggaaaagtacaacaag
gtgatcgacgcctggagccgttgcggcgaccaggtggccaacgccatgatggacgagatc
cgcgccacgccgagcgacgagcacggccgtgaaaagccgatcaactcgatctacatgatg
agccactcgggcgcgcgtggttcgccaacccagatgaagcagctggcgggtatgcgcggg
ctgatggccaagccttcgggcgagatcatcgaaaccccgatcatctcgaacttcaaggaa
ggcctgaccgtccttgaatacttcaactcgacccacggcgcgcgtaagggcctggccgat
accgcgctcaagacggcgaactcgggttacctgacccgccgtctggtcgatgtgtcgcag
gactgcgtggtgacggtgaacgattgcggcaccgagcgggcgctggaaatgcgcgcgatc
gtgcagggcggttcgaccatcgcttcgctgggcgaacgtatcctgggccgcaccctggcc
gaggacatgatcgaggccaagaccggcaaggtgatctgcgaaaagggcacgctgctggat
gaagccgccgtggcgcgcatcgaagcggccggcgtacaatcggcccgcatccgttcgccg
ctgatctgcgaagcgccccagggcgtgtgcggcacctgctatggccgcgacctggcgcgc
ggtacgccggtgaacatcggtgaagcggtcggcgtcattgccgcccagtcgatcggtgaa
cccggcacgcagctgaccatgcgcacgttccacatcggtggcgctgcgcaggtgaacgaa
cagtcgcacctggaatcgatctgcgacggtaccgtgcactatcgcgacatcccgacgatc
accgacagccgcaatcgccgcctgtcgctggcgcgcaacggtgaaatcgtgatcatggat
accgacggccgcgaacgcgccatgcaccgcgtgccttatggtacccacctgctgcacgaa
aacggtgcgacggtggcccagggccagcgcctggccgagtgggacccgttcaccctgccg
gtgatcacggaaaagcccggtatcgtgcgctaccaggacctgatcgacggccgcaccctg
acggaacaggtcgacgaagcgacgggtatcgcccagcgcgtcgtcaccgaaaaccgtgcc
ggtggccgcgcgaagaaggaagacctgcgtccgcgcctgaccctgctcgacgatgcctcg
ggtgaatccgcgcgctacatgatggcgccgggcaccaccctgtcggtggaagacggccag
gaagtccaggccggtgacgtgctggcccgtgccagccgcgaagccgccaagacgcgcgac
atcaccggtggtctgccgcgcgtggccgagctgttcgaggcgcgcaagcccaaggacaac
gcgatcatcgccaagatctcgggccggatcgagttcattcgcgactacaaggccaagcgc
aagatcgcgatcatcccggaagagggcgaaccggtcgagtacctgatccccaagtccaag
gtgatcgacgtccaggaaggcgactacgtcaagaagggcgacaacctgatctcgggctcg
cccgatccgcacgacattctggaggttctcggcgtcgaggccctggcggaatacctcgtg
gcggaaatccaggaagtctaccgcttgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgttcgccagatgctgcagaaggtggaaatcaccgatggcggtgacaccaccctg
ctgccgggcgagcaggttgaccttgaggaaatgaacgaaaccaacgccaagctgccgggg
ggctcgcgcttcgcggaaggcaagccggtgctgctgggcatcaccaaggcttcgctgcag
acgcgttcgttcatctctgccgcgtcgttccaggaaaccacccgcgtgctcacgcaggcg
gcggtcgaagggaagcgcgacagcctgatcggcctcaaggaaaacgtcatcgtcggccgg
ctcattcccgccggtaccggcgctggcatgaaccgcatgcgcgtggcggccaacagccgc
gacgctgccctgcgcgctgccaaccgtcgccttcaggaagccctgatcgcgccgcgcacg
gccgccgaagagcatgccgccgaactggcccaaggccccgaagcggcgatcggcaacgat
acgctggcggctgtcgagggtgaaacccacggcaccgatgccgatgcggccgattacctg
atcaagggcgacgaggactga
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