Nostoc sphaeroides: GXM_03375
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Entry
GXM_03375 CDS
T06325
Name
(GenBank) recQ, ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsh
Nostoc sphaeroides
Pathway
nsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXM_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsh03019
]
GXM_03375
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_03375
Enzymes [BR:
nsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM_03375
Messenger RNA biogenesis [BR:
nsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXM_03375
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GXM_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFS45896
UniProt:
A0A5P8W0V0
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All DBs
Position
Gxm1:3060423..3061880
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AA seq
485 aa
AA seq
DB search
MIMNQPTIKSWQEVLATFKKIWGYEDFRPPQGEIVSSLLAQKDALIIMPTGGGKSICFQL
PALLQTGLTLVVSPLVALMENQVQELRESNQKAALLHSELSSSQRRATLQALERQQLRLL
YLSPETLLSAPVWERLCQPQLQINGLILDEAHCLVQWGDTFRPAYRRLGAVRPALLKSKP
PGTKISIAAFTATADPLAQKIIQTVLQLQQPEIFRLNPYRPNLHPSVRIAWTPRGRKQQL
LKFIQNRPQQSGLVYVRTRRDSEDLAEWLAEMGYATASYHAGLGATERRAVEASWLSGKI
PFVVCTCAFGMGINKSDVRWVAHFHAPHLLSEYVQEIGRAGRDGKPAEALTLVSEPTGWL
DPEDKQRQEFFQEKMRSQQQIAQQLVKKLPKQGEVNAVTRQFPEGATALALLHSNGQLNW
LDPFHYTISQKAGNQPATQLHAAKQMHQYLTTKQCRWQFLLNAFGFDKEAANLRCGHCDN
CRRRV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgattatgaatcagccgacaataaaatcttggcaagaagttctcgctacgtttaaaaaa
atctggggttatgaagattttcgtccgccacaaggagaaattgtcagcagtttattggca
caaaaagatgcgctgattattatgcccacaggtggaggaaagtcgatttgttttcaactt
cccgcactactacaaacaggattaaccttggtagtttcgcccttggtggcgttgatggaa
aatcaagttcaggaactacgagaaagcaaccaaaaggctgcacttttgcatagtgaatta
tcttcatctcaacgccgtgcaactctgcaagctttagaacgccaacagctaagattgctt
tatttatcgccagaaactttgctaagtgcgccagtctgggaaagattatgtcagccgcaa
ttgcaaattaatggcttaattttggatgaagcccattgtttagtgcagtggggtgatact
tttcgcccagcttatcgcagattaggggctgtgcgtccggcattattaaaatcaaaacca
ccaggaacaaaaatcagcatcgccgcttttactgcgactgctgaccccttagcgcaaaaa
attattcaaacagttttacaattacagcaaccagagattttccgcttgaatccctaccgt
cctaatttgcatcccagcgttcgcattgcttggacaccacgaggtagaaaacaacaatta
ttaaagtttattcaaaatagaccacaacaatcggggttagtttatgttcgcactcggaga
gatagcgaagatttggctgaatggttagcagagatgggttatgcaacagctagttatcat
gcaggattgggtgcaaccgaacgccgtgcagtagaagcaagctggttaagtggcaaaatc
ccctttgttgtgtgtacctgtgcgtttggtatggggataaacaaatcagatgttcgctgg
gtagcccattttcacgcaccacatttgttatctgaatatgtgcaagaaattggccgggct
ggaagggatgggaaaccagcagaagcgttgacgctggtaagcgaacctacggggtggtta
gatccagaggataagcaaagacaggaattttttcaagaaaaaatgcgatcgcaacaacaa
atagcgcagcaacttgtgaaaaaattaccaaaacagggagaagtgaatgcagtaacccga
caatttcctgaaggtgctacggcattagcattactccatagcaacggtcagttaaactgg
cttgatcctttccattacactattagccaaaaagcgggaaatcagccagcgacgcaatta
cacgctgctaaacagatgcatcaatacctgacaactaagcagtgtcgttggcagttttta
ttaaacgcctttggttttgacaaagaagccgctaacttgcgttgtggacattgtgacaat
tgccgtcgccgagtataa
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integrated database retrieval system
