Nostoc sphaeroides: GXM_04445
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Entry
GXM_04445 CDS
T06325
Name
(GenBank) recQ, ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsh
Nostoc sphaeroides
Pathway
nsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXM_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsh03019
]
GXM_04445
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_04445
Enzymes [BR:
nsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM_04445
Messenger RNA biogenesis [BR:
nsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXM_04445
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GXM_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
HTH_11
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QFS46964
UniProt:
A0A5P8W2X5
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All DBs
Position
Gxm1:complement(4021990..4024089)
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AA seq
699 aa
AA seq
DB search
METNLYKQGLLLLRQALDNSTADFRPGQWEAIEELLQERSRLLVVQRTGWGKSLVYFLAT
RLLRDQGAGCTLLISPLLALMRNQIAAAQRIGVKAETINSSNTDKWPLIAKQLLATEVDI
LLISPERLGNEDFREKILLPVSQRIGLFVVDEAHCISDWGHDFRPDYRRIVRILQALPQN
IPVLATTATANNRVVNDIIAQLGSNLRVSRGNLTRESLHLQNISIPSPAARMAWLAQQLP
NLPGSGIIYTLTVRDAELVADWLKTQNINAKAYHSNLESDDRVILEDELLQNKIKALVAT
TALGMGFDKPDLGFVIHYQRPGSVVHYYQQVGRAGRAVEKAYGILLSGDEDDDITNYFIN
TAFPPEIHTQQILNTLNEAVDGFSVPQLEQQLNLSRGQIDKVLKLLSLEFPAPVTKQDSK
WYLTAVSYQPDTDKIEKLTQIRRQEQARMLEYMQSQQCLMSFLAVELDDPHPTACGKCAV
CLNQPLLTETCSIELVNKAIQYLRRSNQIIEQRKRWPSQALVNYGFSGNIKNNLQAEAGR
ALSLWGDAGWGELVKQGKYQNNHFDDALVQGAFEMIQHWQPQPFPTWVTCVPSLNRPELV
PNFAQRLAEKLGLPFIPIVWKVHQTELQKKMSNSYQQAHNLDGAFAVDSWKGMSASVFLV
DDIVDSRWTFTVIAALLRRANSGMVFPVALALNSLGQGD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaacctctacaaacaaggattattgcttctgcgtcaagcgcttgataactcc
acagccgactttcgccctggacaatgggaagctattgaagaattactccaggagcgatcg
cgcttacttgttgttcaacgcactggttggggaaaaagtctagtttattttttagcaact
cgcctgttacgagatcaaggtgctggttgtactcttttgatttcgccattactagctttg
atgcgaaaccaaattgcagcagcccaacgcattggtgtaaaagctgaaacaattaactcc
agcaatacagataaatggccattaatagcaaaacagttgctagcaacagaagtagatatt
ctgcttatttctcccgaaagactaggtaacgaagattttcgagaaaaaattcttttgcca
gtatctcaacgtattggtttatttgttgttgatgaagcccattgtatctctgattgggga
catgattttcgccctgattatcgacggattgtcagaattttacaagcacttccacaaaat
attccagtattagcaacaaccgcaacagctaacaatcgagttgtaaatgatattattgct
caattgggttcaaatttgcgtgtttccagaggaaatttaaccagagaaagtttgcatctg
caaaatatttctatccctagcccagcagcacgaatggcatggttagctcaacagcttcct
aacttacctggaagtggaattatttacacattaactgttagagatgctgaactagttgct
gattggttaaaaactcagaatattaatgctaaagcatatcatagtaatttagagagtgat
gatcgtgtaatattagaagatgaacttcttcaaaataaaattaaagccttagttgctact
accgcattaggaatgggttttgataaaccagatttaggatttgtaattcattaccagcgt
cctggctcggttgtccactattatcagcaagtgggacgagcaggtagagcagtagaaaaa
gcttacggaattcttctaagcggtgatgaagatgatgatatcactaactactttatcaat
acagcttttcctccagagatacatacgcaacagattttaaatacactcaacgaagctgta
gacggcttttctgttccacaattggagcagcaactaaatctttcacgaggacaaattgat
aaagttttaaaactgctatcactggaatttcctgcacctgtaactaagcaagattcaaaa
tggtatcttaccgcagtatcttatcaacctgacactgataaaattgaaaaactcacacaa
attcgccgccaagaacaagctcgaatgttggaatacatgcaaagccaacaatgcctgatg
agttttctggcggtagaattagatgatcctcatccaactgcttgcggcaaatgtgctgtg
tgcttgaatcaaccattattaacagaaacttgctcaatcgaacttgtaaataaagcaatt
caatatttacgccgtagcaaccaaatcattgaacaacgcaaaagatggccatcacaagca
ttggttaattatggcttttcaggcaatattaaaaataatttacaagcagaagcgggaagg
gcattatctctatggggcgatgcaggttggggagaattagtcaagcagggtaaatatcaa
aataatcattttgacgatgctttggtgcagggtgcttttgagatgattcaacattggcaa
ccacaaccttttccaacctgggtaacttgtgtcccttcgttgaatcgtccagaacttgta
ccaaattttgctcaaagactagcagaaaaattaggcttaccctttataccaattgtgtgg
aaagttcaccaaactgagttacaaaaaaagatgagcaacagttaccaacaagctcataat
ttggatggtgcttttgctgttgattcttggaaaggaatgagtgcttctgttttcttggtt
gatgatatagttgattcccgttggacttttactgtaattgcagcacttttgcggcgtgct
aacagtgggatggtttttcctgtagcattagcactcaattcattaggccaaggggattag
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