Neisseria mucosa FDAARGOS_260: A6J88_04120
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Entry
A6J88_04120 CDS
T04958
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Pathway
nsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6J88_04120 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsi03021
]
A6J88_04120 (rpoB)
03400 DNA repair and recombination proteins [BR:
nsi03400
]
A6J88_04120 (rpoB)
Enzymes [BR:
nsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6J88_04120 (rpoB)
Transcription machinery [BR:
nsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6J88_04120 (rpoB)
DNA repair and recombination proteins [BR:
nsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6J88_04120 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ARC50547
UniProt:
A0ABN4Y4C7
LinkDB
All DBs
Position
804213..808391
Genome browser
AA seq
1392 aa
AA seq
DB search
MNYSFTEKKRIRKSFAKRENVLDVPFLLATQIDSYAKFLQLENAFDQRTDDGLQAAFNSI
FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE
VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSENG
VQTDLVVGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDISNAGLTRLDVEPESLIGK
ALAADLIDPETGEVLAVANDEITEELLAKFDIHGVKQLTTLYINELDQGGYISNTLRTDE
TVDQQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS
EAQQHSWYGRLLNETFAGAAEKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV
RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ
FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
SLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDL
VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL
RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL
VKFTRSNQSTNINQRPAVKAGDVLQRGDLIADGASTDLGELALGQNMTIAFMPWNGYNYE
DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI
GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV
FTREGIQRDKRAQSIIDSELKRYRQDLGDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK
GSEISTEYLAGLPSKHDWFDIRLSDEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQG
DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNGSGKKEDLD
ALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSNDPEVEKLGFNDSKTQI
TLYDGRSGEPFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAYTLQEMLTVKSDDVTGRTKMYENIVKGEHKIDAGMPESFNVLVKEI
RSLGLDIDLERY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgcgaaacgagagaac
gtattggacgttccctttttgttggcaacacaaattgattcttatgcgaaatttctgcaa
ttagaaaatgctttcgatcagcgcactgacgatggtctgcaggctgcatttaattctatt
ttccctatcgtaagccacaatggttatgcgcgtctggagtttgtgcattacacgttgggt
gagcctttgttcgatattcctgaatgtcaattgcgcggaatcacttatgcagcccctttg
cgcgcgcgtatccgactggttattttagacaaggaagcgtctaaaccgacagtcaaagaa
gttcgtgaaaatgaagtgtacatgggcgaaatcccattgatgactccaagtggttcgttt
gtcattaacggtaccgagcgtgtaattgtttctcagttgcatcgttctcccggtgtgttc
tttgagcatgaccgtggtaaaactcattcctccggtaaattgttgttctctgctcgaatc
attccttaccgtggttcgtggttggatttcgaatttgacccgaaagatttgctgtatttc
cgtatcgaccgtcgccgtaaaatgccggttacgattttgttgaaggccttgggctacaac
aatgagcagatcttggatattttctacgataaagaaacgttctatctgtctgaaaatggt
gtccaaactgatttggttgtaggtcgtctgaaaggtgaaactgccaaagttgatatcttg
gataaagaaggcaacgtattggttgctaagggtaaacgtattaccgcaaaaaatatccgt
gatattagcaatgcaggattgactcgtttggatgtggagccggaaagcctgattggcaaa
gctttggccgcggatttgattgaccctgaaacgggtgaagtattggctgtggccaatgat
gaaatcactgaagaattattggcaaaatttgatatccatggtgtaaaacagcttactacg
ctttacattaatgaattggatcagggtggctacatttccaatactctgcgcactgatgag
actgttgatcagcaagcagcacgtgttgcgatttaccgcatgatgcgcccgggcgaaccg
cctaccgaggaagcagtcgagcagctgtttaaccgcttgttcttcagtgaagacagctac
gatttgtctcgcgtaggccgtatgaaattcaatacgcgtacttatgagcaaaaattgtct
gaagcacaacaacattcttggtatggccgtttgttgaacgaaactttcgcaggtgctgcc
gaaaaaggcggttatgtcctgagcgttgaagatattgttgcatcaattgctactttagtt
gaattgcgaaacggtcatggcgaagtggacgatatcgaccacttgggcaatcgtcgtgtg
cgttcggtaggtgagttgactgaaaaccaattccgcagcggtttggctcgtgtggaacgt
gccgtaaaagaacgcctgaatcaagcggaatcagaaaacttaatgccgcatgatttaatt
aatgcgaaacctgtttctgctgccatcaaagaattcttcggctcaagccaattgagtcag
tttatggatcagaccaaccccttgtctgaagtaacccataagcgccgtgtatctgcgtta
ggcccgggtggtttgacccgtgaacgagccggtttcgaggtgcgagacgtgcatccgact
cactatggccgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttgattaac
tcattgtccgtttatgcacgtaccaatgattatggtttcttggaaactccttatcgccgc
gttatcgacggcaaagtaaccgaggaaatcgattacttgtctgccatcgaagaaggccgt
tatgtgattgcacaggcgaatgctgatttggacaaagatggtaatttgattggtgacttg
gtaacttgtcgtgaaaaaggcgaaaccattatggcaacgcctgaccgtgtgcaatatatg
gacgtggcaaccggtcaagtggtatccgtagcggcatccctgattccgttcttggaacac
gatgatgcgaaccgtgcattgatgggtgccaacatgcaacgtcaggccgtaccgtgcctg
cgtcctgaaaaaccgatggttggtaccggtattgagcgttccgttgccgttgactctgct
actgcaatcgttgcccgtcgtggcggtgtggttgagtatgtagatgccaaccgtgttgtg
attcgtgttcatgacgatgaagcgactgctggtgaagtgggtgtcgatatttacaacttg
gttaaattcactcgttccaaccaatctaccaacattaaccaacgtcctgcggtcaaagcc
ggcgacgttttgcaacgcggcgatttgattgctgacggtgcatccactgatttgggcgaa
ttggccttgggtcaaaacatgaccatcgccttcatgccgtggaacggttataactatgaa
gactcgattctgatttccgaaaaagtagctgcagacgaccgctatacttcgattcacatt
gaggaattgaatgtcgttgcccgcgataccaagctgggtgcggaagatatcacccgcgat
attccgaacttgtccgagcgtatgcaaaaccgtttggacgaatccggtatcgtttatatc
ggtgcggaagtggaagccggcgatgtattggttggtaaagtaacgcctaaaggcgaaacc
caactaactccggaagaaaaactgttgcgcgccatcttcggtgaaaaagcatccgacgta
aaagacacctctttgcgtatgcctaccggcatgagcggtacggttatcgacgttcaagtc
tttacccgcgaaggtatccaacgcgacaaacgtgctcaatccattatcgattccgagctg
aaacgttaccgtcaagacttgggcgatcagttgcgtatttttgataacgacgcattcgac
cgtattgagcgtatgatcgtcggccaaaaagccaacggcggtccgatgaagctggctaaa
ggcagcgaaatttcgacagaatatctggcgggtctgcctagcaaacacgattggttcgat
atccgtttgtcagatgaagatttggccaaacaattagaactgattaaattgagtctgcaa
caaaaacgcgaagaagcggacgagttgtacgaaatcaagaagaaaaaactgacccaaggc
gacgaattgcagcctggcgtacaaaaaatggtaaaagtctttatcgccatcaaacgccgt
ctgcaagcaggtgacaaaatggcgggccgccacggtaataaaggtgtggtatcgcgcatt
ctgcctgtggaagacatgccgtacatggcggacggtcgtcctgtggacatcgtactgaat
ccgttgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttgggttgg
gcggcaaaaggtatcggcgagcgtatcgatcgtatgctgaaagagcaacgcaaagccagc
gagctgcgcgagttcttgaacaaactctacaacggcagcggtaagaaagaagatttggat
gccctgactgatgaagaaatcatcgaactggcttccaatctgcgtaaaggcgcatctttt
gcatcgccggtatttgatggtgcgaaagaatctgaaatccgcgaaatgctgaatttggct
tatccgagcaatgatcctgaagtcgaaaaactgggctttaacgacagcaaaacccaaatc
acgctgtatgacggacgctctggcgaaccgtttgaccgcaaggtaacagtaggtgtgatg
cactatctgaagctgcaccacttggttgacgaaaaaatgcacgcgcgttctaccggtccg
tatagtttggttactcaacagcctctgggcggtaaagctcagttcggtggtcaacgtttc
ggtgagatggaggtttgggcgctggaagcatacggcgcagcctacacactgcaagagatg
ttgaccgtgaagtccgacgacgtaacaggccgtacaaaaatgtacgagaacatcgtcaaa
ggcgagcacaaaattgatgccggtatgcctgagtccttcaacgtattggttaaagagatt
cgctcactgggcttggatattgatttggaacgttactaa
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