Nocardia mangyaensis: BOX37_28715
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Entry
BOX37_28715 CDS
T04582
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nsl
Nocardia mangyaensis
Pathway
nsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BOX37_28715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsl03400
]
BOX37_28715
Enzymes [BR:
nsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BOX37_28715
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BOX37_28715
DNA repair and recombination proteins [BR:
nsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BOX37_28715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
zf-TFIIB
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
APE37255
UniProt:
A0A1J0VZA5
LinkDB
All DBs
Position
complement(6419817..6420686)
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AA seq
289 aa
AA seq
DB search
MPELPEVEALAQFLRDHAVDAVVGRVDVAALSAVKTFDPPVTALSGRDVTGAGRWGKFLG
MDCGGLWLITHLSRGGWLRWVDEPNPLPPKPGGKSPLALRVHFFTPEGATPAIDLTEAGT
KKRLAVYVVEDPMTVPGIARLGPDALAVTEDEFAAILRDNSQRIKTALVDQTLLAGIGNA
YSDEILHTAKISPFANTKTMSAEKVSQLYAAMRTVLLDAVERSTGQDAARLKGEKRSGMR
VHARTGQPCPVCGDTVREVSYAERSFQYCATCQTGGKVLADRRMSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctacccgaggtagaggcgttggcgcagttcctgcgggatcatgcggtcgac
gcggtcgtggggcgagtcgatgtggcggcgttgagcgcggtgaagacgttcgatccgccg
gtcaccgccctgtccggtcgtgacgtcaccggcgcggggcggtgggggaagttcctcggg
atggattgtggcgggctgtggttgatcacccatctgtcgcgtggcggctggttgcgctgg
gtcgacgagccgaatccgttgccgcccaagcccggtgggaagagtccgctggcgctgcgc
gtgcatttcttcacacccgagggcgcgacaccggcgatcgatctgaccgaggcggggacg
aagaagcggctggcggtgtacgtcgtcgaggacccgatgaccgtgccgggaatcgcgcgc
ctcggtcccgacgcgctggcggtgaccgaggacgagttcgcggcgatcctgcgcgacaac
tcgcagcggatcaagaccgcgctggtcgaccagaccctgctggccggcatcggcaacgcc
tactccgacgagatcctgcacaccgcgaagatctcgccgttcgcgaatacgaaaaccatg
tcggcggagaaggtctcgcagctctacgcggccatgcggacggtgctgctcgacgcggtc
gagcggtcgaccgggcaggacgcggcccggttgaagggcgagaaacggtccgggatgcgg
gtgcacgcgcggaccgggcagccgtgcccggtgtgtggtgacaccgtgcgcgaggtgtcc
tacgcggagcgctcgttccagtactgtgccacctgtcagaccggcggcaaggtcctcgcc
gaccggcggatgtcgcggctgctcaagtaa
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