Neotabrizicola shimadae: JO391_18295
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Entry
JO391_18295 CDS
T08148
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm01501
beta-Lactam resistance
nsm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JO391_18295
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JO391_18295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsm02000
]
JO391_18295
01504 Antimicrobial resistance genes [BR:
nsm01504
]
JO391_18295
Transporters [BR:
nsm02000
]
Other transporters
Pores ion channels [TC:
1
]
JO391_18295
Antimicrobial resistance genes [BR:
nsm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JO391_18295
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JO391_18295
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JO391_18295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HVO_2833_C
Motif
Other DBs
NCBI-ProteinID:
QYZ69624
UniProt:
A0A8G0ZX29
LinkDB
All DBs
Position
3777688..3779136
Genome browser
AA seq
482 aa
AA seq
DB search
MMHTKALLGGMMAAMLCACTVGPDYVRPDVATPASFRFAVQGSADAANVEWWKEFGDPTL
VDLINRALAQNWDLKAAAARVDQAGAILLKDSSGLYPSARYSGVAERARVSESTGEGTPV
PNPNSLYEPLIDAGWQLDLWGRIRRQSQAAQANLVGAEEARRGVVLTLVASVAEAYLRLR
ALDAQLQIAKETQATYGEQLQLFQDRFTYGQISEVTLSQVQAEYETASAAVPQIEAQIGT
TENALSVLIGQPPQAIPRGRSFAALRLPRVPAGLPSDLLTRRPDIAQAEADLIAANADIG
AAEALLYPNVSLTGSLGRASDDLGNLLDGSAASWAVGADLVGPIFNGGLIRGGILVTKAQ
KAEAVANYQQAILNALREVSDGLVDYTQSGRRLVSEQKLVAAQETTARLAMLSFNEGMES
YTTVLIAQEDLFESRLSEIQTRYDMMASMVRIYKAMGGGWVDKAAVRAPQPQPTPTVLQS
GG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacaccaaggccctgttgggcggcatgatggccgccatgctttgcgcctgcacg
gtcgggcccgattacgttcgcccggacgtcgcgactcccgcgagtttccggttcgcggtc
cagggatcggcggatgccgcaaacgtggaatggtggaaagagttcggcgacccgacgctg
gtcgatctcatcaaccgcgccctcgcgcagaactgggatctgaaggctgccgccgcccgt
gtggatcaggcgggcgcaatcctgttgaaggacagctccggtctttacccaagtgcccga
tactccggcgtggccgaacgtgcgcgggtgtcggaaagcacgggcgagggcacacccgtc
cccaacccgaattcgctgtacgagcctctgatcgatgccggttggcagctcgatctgtgg
gggcgcatccggcgccagagccaggccgcacaagccaatctcgtgggggcggaagaggcc
cggcgcggtgttgtcctgacgctggtcgcctctgtcgccgaggcctacctgcgcctgcgc
gccctggatgcccagttgcagattgccaaggaaacgcaggcgacctacggcgaacagctt
cagctgttccaggaccgctttacctatggccagatttccgaggtgacactcagccaggtg
caggccgaatacgagacggcatccgccgccgtgccccagatcgaggcgcagatcggcacg
accgaaaatgccttgtccgtcctgatcggccagccgccgcaggccatcccgcgcggccgg
tccttcgccgcgctgcggttgccgcgcgtcccggcgggccttccctccgaccttctgacc
cgccggcccgacatcgcccaggccgaggccgatctgatcgcggccaatgccgacatcggg
gcggcagaggcgctgctttaccccaacgtctcgctgaccggcagccttggccgcgcttcg
gacgaccttggcaatcttctggacggatcggccgcctcctgggcggtcggcgccgatctt
gtcgggccgatcttcaatggcggcctgatccggggcggcatcctggtgaccaaggcccag
aaggcggaagccgtggcgaactatcagcaggcgatcctgaacgcgctgcgcgaggtgtcc
gacggccttgtcgactatacgcaaagcgggcgacggctcgtgtccgagcagaagctggtc
gcggcacaggaaacgacggcgcggctggccatgctcagcttcaacgaaggcatggaaagc
tacaccacggttctgattgcgcaggaggatctgttcgaaagccggctttcagagatccag
acccggtatgacatgatggcaagcatggtccgcatctacaaggccatgggcggcggctgg
gtcgacaaggccgccgtccgggccccgcagccgcagccgaccccaacggttctgcaatcg
ggtggatag
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