Niabella soli: NIASO_08610
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Entry
NIASO_08610 CDS
T03682
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nso
Niabella soli
Pathway
nso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIASO_08610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nso03400
]
NIASO_08610
DNA repair and recombination proteins [BR:
nso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIASO_08610
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHF15204
UniProt:
W0F192
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Position
1860035..1862656
Genome browser
AA seq
873 aa
AA seq
DB search
MAKVKNNPQDTPLMQQHKAIKQKYPDAILLFRVGDFYETFGQDAVIASQVLGITLTKRNN
GAAASLDLAGFPHHSLDTYLHKLVKAGYRVAICDQLEDPKQAKGIVKRGVTEMLTPGTAV
NDKLLEHKNNNFLAGIHFTDNDQFGLAFLDLSTGAFFIAEGDKEYADKLLQSFNPSETIF
QRHQQKRYKEYFGGKTYIYTLDEWIFDVTYAQDTLLKHFQTHSLKGFGIEGLELGITAAG
ALIHYLRDTEHPNLQHITAIESIRKNDFLWMDKFTIRNLELMGGGPDQHTLISVLDNTTS
PMGARLLKRWMIFPLIDIQKINERLDVVELLIKETDLRQSLIQAIKQCGDIERLVAKIPT
KKINPREILQLARGLQQVAIIKQLCEAEQQGYLQQVGAALDPCPIIAAKISAQIIENPPA
SIAKGGMIQTGVLPGLDELRTISQNGKAYLAQLQTKEAEQTGISSLKIGFNNVFGYYLEV
TNIHKAKVPDSWIRKQTLTNAERYITPELKEYEEKITGAEEKILTLEQQLYEQLLNELFT
WLVPIQTNGNLIAVLDCLCCFAHNALQYQYKRPVVHEGADWSVKEARHPVIERNLPVGEA
YISNDLELNKTDQQIIILTGPNMSGKSALLRQTALITLMAHMGSFVPATEAHIALTDKIF
TRVGASDNLSGGESTFMVEMNETASIINSITDRSLVLLDEIGRGTSTYDGISIAWSIAEY
LHQSPHKPKTLFATHYHELNELEEKFTGIKNYHVTNKEIGNKIIFLRKLARGGSTHSFGI
HVAKMAGMPPALINRANQILEQLEHKHVDEKNAGTSITEKIKDITNPKFQLSIFDVHSQT
FDEIRQLLTDIDINRLTPVEALLKLQEIKGKLQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtaaaaaataacccccaggataccccgctgatgcagcagcataaggcgatt
aagcagaaatacccggatgcaatactcctgtttcgtgtgggtgacttctatgaaaccttt
ggccaggacgccgtcatagcgtcccaggtgctgggcattacgctaaccaaacgcaataac
ggggccgccgcctcgctggaccttgccggttttccgcaccattcgctggatacttattta
cacaaactggtgaaagcgggctaccgggtggcgatctgcgatcagttggaagatcctaaa
caagccaagggcatcgtaaaacggggtgttaccgaaatgcttacaccgggcacggcagtg
aacgacaaactgctggagcataaaaacaataattttcttgcagggattcattttaccgat
aacgatcagttcggtcttgcctttttagatctttctaccggcgcgttttttatcgccgaa
ggcgacaaagaatacgcggataaattgctgcaaagctttaacccgtcagaaacaatcttt
caacggcatcaacaaaaaagatataaagaatactttggcggtaaaacttatatttatacg
ttagacgaatggatctttgacgtaacgtatgcacaggataccttgctaaaacatttccag
acacattcattaaaaggctttgggattgaagggctggaactgggcattactgccgcaggc
gcattgatccactacctgagagataccgagcatccgaatcttcagcacataaccgccatt
gaaagcatccgcaaaaatgattttctgtggatggataagttcaccatccgtaatctcgaa
ctgatgggcggcggccctgatcagcataccctcatcagtgttttggataacaccacctcc
cccatgggagcgcgcttattaaaacgatggatgatctttccactgatcgacattcaaaaa
ataaacgagcggctggatgttgtggaactgctgatcaaagaaacagatcttcgtcaatct
ttaatacaggcgatcaaacaatgtggagatatagaacgactggtagcaaagatccccaca
aaaaagatcaatcccagggaaatattacaactcgccaggggactgcaacaggtggctatt
atcaaacaactttgcgaagccgaacaacaaggctatttgcaacaggtgggtgctgcattg
gatccctgtcctataattgcggcgaaaataagtgcacagattattgaaaaccctccggcc
tcaatagccaaaggaggaatgatccaaaccggcgtgctgcccgggctggatgaattaaga
acgatctctcaaaacgggaaagcctacctggcccaattgcagaccaaagaggcagaacag
acgggcatcagctcgcttaagatcgggttcaacaatgtatttggttattatcttgaagta
accaatattcataaggcaaaggttcccgacagttggattcgcaagcagacccttaccaat
gcggagcgctacatcacccctgaattaaaagaatacgaagagaaaattaccggcgccgaa
gaaaaaatactgacgctggaacaacagctttacgagcagttgctaaatgaattgtttacc
tggctggtccccattcaaacgaacggcaatcttatcgccgtgctggattgcctttgctgc
ttcgcacataatgcgctgcagtatcaatataaacggcccgttgttcatgaaggcgcagat
tggagtgtaaaagaagcaagacatcccgtgattgagcgcaatctgccggtgggtgaggcc
tacatcagcaatgacctggaactgaataaaaccgatcagcagatcatcattcttaccggt
ccgaacatgagcggtaaatcagcactgttaagacaaacagcgctgatcaccctgatggcg
catatgggaagttttgttccggcaactgaagcccatattgcattgaccgataaaatattt
acccgtgtgggcgcttccgacaatctaagtggcggcgaaagtaccttcatggtggagatg
aatgaaacagcctccattattaatagtattaccgacagaagcctggtgttacttgatgaa
ataggtcgtggtacttctacctatgatggcatttccatagcctggagcattgccgaatac
ctgcatcaatcgccgcacaaacccaaaacactatttgccacccattaccacgagcttaat
gaactggaagaaaagttcacgggcatcaaaaactatcatgtcaccaataaagaaataggc
aataagatcatcttcctgcgcaaactggcgcgtggtggcagtacccatagctttggtatt
catgtagccaagatggccggtatgccgccagccctgatcaaccgggctaaccagatactg
gaacaactggaacataaacatgttgatgaaaaaaacgccggcacttccatcacagaaaaa
ataaaagacatcactaacccgaaattccagctctcgatatttgacgtgcacagccaaact
tttgatgagatccggcaattgctcacggatatcgacattaaccggctcactccggtagaa
gcgctgctgaaattacaggagataaagggaaaattacagtag
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