Nocardia sputorum: IFM12276_23670
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Entry
IFM12276_23670 CDS
T09151
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nspu03051
]
IFM12276_23670 (pafA)
Enzymes [BR:
nspu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
IFM12276_23670 (pafA)
Proteasome [BR:
nspu03051
]
Prokaryotic proteasome
Bacterial regulatory particles
IFM12276_23670 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
BDT99338
UniProt:
A0ABN6U2G2
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All DBs
Position
2548313..2549656
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDNLAQLVTHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYARAVEHLRNRDRDPQIDQVVDL
WGRTLDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRYGMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAKRVTEDEAVDAAVDTPPQTTRAKLRGDFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgagaccgagttcggtgtgacatgcaccttccacggtcaccgtcgactgtcc
cccgacgaggtggcccggtatctgttccgccgggtggtgtcctggggccgtagctcgaac
gtgttcctccgcaacggtgctcggctctacctcgatgtcgggtcccatccggagtacgcg
accgcggagtgcgacaacctggcgcaattggtgacccacgaccgtgcgggcgagcgggtc
cttgaagagttgctgatcgacgccgagcagcgtctggccgaagaaggcatcggcggcgac
atctatctgttcaagaacaacaccgactcggcgggcaactcctacggctgccacgagaac
ttcctggtggttcgcgcaggcgagttctcccggatctcggacgtgctgctgccgttcctg
gtcacccgccagctgatctgcggcgcgggcaaggtgctgcagacgccgaaggccgccacg
ttctgcttgtcgcagcgtgccgagcacatctgggagggcgtctcctcggcgaccacccga
tcgcggccgatcatcaacacccgcgacgagccgcacgccgacgcggagaagtaccgccgc
ctgcacgtcatcgtcggcgactcgaacatgtccgagaccaccaccatgctgaaggtcggc
acggccgccttggtgctggagatgatcgaggcgggcgtctcgttccgcgacttcgcgctg
gacaacccgatccgcgcgatccgcgaagtgagccacgacctgaccggccgccgtccggtg
cgcctggcgggcggacggcaggccagcgccctggacatccagcgcgagtactacgcccgc
gctgtggagcatctgcgcaaccgggaccgcgatccccagatcgaccaggtggtcgacctg
tggggccgcaccctggacgcggtcgaggcacaggacttcgcgaaggtcgacaccgagatc
gattgggtgatcaagcgcaagctgttccagcgctaccaggaccggtacggcatggagctg
tccgatcccaagatcgcacagctggatctggcctaccacgacatcaagcgcggacgcggc
gtcttcgacctgctgcagcgcaagggcctggccaagcgcgtcaccgaggacgaggccgtg
gacgccgcggtcgacaccccgccgcagaccaccagggccaagttgcgtggtgacttcatc
accgccgcccaggaggccggtcgcgacttcaccgtcgactgggtgcatctgaagctgaac
gaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgctcggtcgacgagcgcgtc
gatcgcctgatcgcgtcgatgtga
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