Notechis scutatus (mainland tiger snake): 113418247
Help
Entry
113418247 CDS
T09026
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113418247
04020 Calcium signaling pathway
113418247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nss04040
]
113418247
Ion channels [BR:
nss04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113418247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113418247
NCBI-ProteinID:
XP_026532816
UniProt:
A0A6J1UPD9
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MAGRAVIRSSLLSPPSYYEVVHYGRGPTSPEYPFFSGWYHYMGQEPLSYKRRGGIVDQRD
VIMAHQAHKIHNTPQAKRKEWEMARFGDEVPARYGAGGSGGAGAGTAGGGGGRGAGGVRQ
GGPPGAQRIYKQSMAQRARTMALYNPIPVRQNCLTLNRSLFLFSEDNVVRKYAKKITEWP
PFEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFA
FHKGSYLRNGWNVMDFVVVLTGILSTVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKS
IMKAMIPLLQIGLLLFFAILIFAIIGLEFYLGKFHTACKDIHTDEIMQEAPCGKEATSRL
CPNGTECKEYWQGPNYGITQFDNILFAVLTVFQCITMEGWTNLLYDSNDASGSAWNWLYF
IPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAE
EVILAEDDIEGEPRHPFDALRRATIKKSKTDLLNPEEANDPLADISSVGSPFARASIKSV
TLENATFFHKKERRLRFYIRRIVKTQAFYWTVLSLVALNTLCVAIVHYNQPDWLSDFLYY
AEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAAIKPGTSFGISV
LRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN
FDNGTPPTNFDTFPAAIMTVFQILTGEDWNEVMYHGIQSQGGVDKGMMFSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAA
KEQQKNQKGNKSVWEQRTSEMRKQNLLASREALYNEMDPEDHWKVTYARQMRPDMKTHLD
RPLVVDPQENRNNNTNKTRPNEPPLNPHFGQERSVEFLRKPPRYHAHSREPHLYERPDSG
SLEPRHPRSNSKEIDFNQESRCHDIDYPSKEHSAIPEQGYHGDCASERIKKLDPHRWRQG
SKESQSGSPRTVDGEREHRRHRVHRRIPDDGSGEQSGRVERRPRHREGSGPVRTDMGGEH
PDGERRRRHRHAGQSTYEVDGKERRHRRRKENQGSGHPPGPNLSTTRPIQQDMGHLEPPV
SEDIDNMKNNKLATNETSNSHLISHSQNDPIKGGNHSNSTPYCTSQNQPIPLDQPFLNSQ
NSTSRQTPSNPANPGAPKNPENSLIVTNPTTQNNPSKTAKKSEYTAVEIPPAFPPPINNA
IMQVNKNANPEPLPKKEEEKKKEDDDEGGEDGPKPMPPYSSMFILSTTNPFRRLCHYIVN
LRYFEICILMVIAMSSIALAAEDPVQPSAPRNNVLRYFDYVFTGVFTFEMVVKMIDLGLI
LHRGSYFRDLWNILDFIVVSGALVAFAFTGSKGKDINTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFEKDCRGEYLV
YEKNNEVKAERREWRKYDFHYDNVLWALLTLFTVSTGEGWPDVLKHSVDATYENQGPSPG
YRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAK
PLTRHMPQNKQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYNATSLYDNLLRMFN
IVFTALFSLECILKIIAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGVSSKLVSMTFW
GRE
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgtgctgtgatccgttcatctctgctgtcccctcccagttactatgaagtg
gtacactatggacgtggacctacaagtcctgaatatcctttctttagtggctggtaccac
tatatgggtcaggaacctctttcatacaagcgacgtggaggcattgttgatcaacgtgat
gtcatcatggcccatcaggcccacaaaatccacaacacgccacaggcaaagcggaaggag
tgggagatggctcggtttggagatgaggtgccagcccgctatggggcaggaggttcaggg
ggagctggcgctggaacagcaggcggcggaggtggccggggtgctgggggcgttcggcaa
ggtggtcccccaggggcccagaggatatataaacagtcgatggcccagcgagcccgtacc
atggcactctacaaccccattcctgttcggcagaactgtctgactctcaaccgctccctc
ttcctcttcagtgaagacaacgtggtgaggaaatacgccaaaaagatcaccgaatggcct
ccttttgaatacatgattttagcaactatcatagcaaactgcattgtccttgctctggag
caacatctacctgatggagacaagacaccaatgtcagaacgattggatgacactgaacca
tacttcattggaatattttgttttgaggctggaattaaaattattgccttaggatttgct
ttccacaagggatcctacctaaggaatgggtggaatgtgatggattttgtggtggttctc
acgggcattttgtcaacagttggtactgaatttgacttgcgaactttgcgggcagttcgt
gtactccggccactaaagttagtgtcgggaattccaagtttacaagttgtccttaagtcc
ataatgaaggccatgatacctctgctacaaattggcctcctcctattttttgcaatcctt
atttttgcaatcatagggttagaattttatttggggaaatttcacaccgcctgcaaggat
attcatacagatgaaatcatgcaagaagctccatgtgggaaagaagcaacgtcacgcctc
tgccctaatgggactgagtgtaaagaatactggcaaggacccaactatgggataacacag
tttgataacatcctcttcgctgtgctgactgtcttccagtgtatcaccatggaagggtgg
actaacctcctctatgatagcaacgatgcctcagggagtgcttggaactggctatacttc
atccctctcatcatcattggatccttttttatgctcaatcttgtgctgggggtgctttct
ggggagtttgccaaagaaagggaacgagtagaaaatcggcgtgcatttctgaagttgaga
agacaacagcaaattgaacgggagctcaatggctatatggagtggatctccaaagcagaa
gaagtcatcctggctgaagatgatatagaaggagagcctcgtcatcccttcgatgctctt
cggagggccactatcaagaaaagcaaaacagacttgctgaacccagaggaagcaaatgac
ccactggcagacatctcttcagtaggttcaccttttgctcgagccagcatcaaaagtgtc
acgctggaaaatgctactttctttcacaaaaaagagcggaggttgcgtttctatatccgt
cgtattgtcaaaactcaggccttttactggacagtcctcagtctggtagctctcaacact
ttgtgtgttgctatagtacattacaaccagccagattggctatctgacttcctctactat
gcagaattcattttcttagggctctttatgtccgaaatgtttataaaaatgtatgggctt
ggaacgcggccttactttcattcatctttcaactgctttgattgtgctgttatcattggg
agcatctttgaggtcatttgggctgcaataaagcctggcacctcctttgggataagcgtc
ttacgagctctcaggttactgcgtattttcaaagtcacaaagtactgggcttccctacga
aacctagttgtatctctgctgaactccatgaagtccataatcagccttcttttcctcctt
ttcctcttcatagtcgttttcgcccttttgggaatgcaactctttgggggccagttcaat
tttgataatggaaccccaccaaccaattttgacacttttccagcagcaataatgacagta
tttcagatcctgactggcgaagactggaatgaagtgatgtatcatggtatccaatctcag
ggcggtgttgataaaggaatgatgttttcaatctatttcatagtcctgaccttgtttggt
aactacactttgctcaatgtgtttttggctattgctgtggataatttggccaatgcacaa
gagctcaccaaggatgaacaagaagaagaagaagcagctaaccagaaacttgccctccag
aaggcgaaggaagtagcagaagtgagtcctctttctgcagccaacatgtcaatagcagcg
aaagagcagcaaaaaaatcaaaaaggcaacaaatctgtttgggaacagcggacaagtgaa
atgcggaaacagaatttgctggcaagtagagaggccctatacaatgagatggaccctgag
gatcattggaaggttacatatgcccggcaaatgcgtccagacatgaaaactcacttagac
agaccactggtagtagatcctcaagaaaatcggaataacaacaccaacaagacccgtccc
aatgaaccacccttgaatccccactttggacaggaacggtctgtagaattcctacgaaaa
ccacctcgttaccatgcacattcacgagaaccccacctatatgagcgtcccgactcagga
agcttggagcctcgacacccaaggagcaatagcaaggaaattgactttaatcaagaaagt
agatgtcatgatattgattatcccagcaaggagcatagtgccattccagagcagggttat
catggtgactgtgcctcagagcgcataaaaaaattagatccccaccgctggcgccaaggt
agcaaagaaagtcagagtggatcacctcgtacggtagatggtgaacgggagcatcggagg
catagagtacaccgccgaataccagatgatggaagtggtgaacagagtggcagagttgag
cgtcgccctcggcatcgtgaggggagcggacctgtacgaactgacatgggtggggagcat
cctgatggagaaaggcgccgacggcaccggcatgctggacagtccacttatgaagttgat
ggcaaggaacgccgacaccgacgcaggaaagaaaaccaaggatctggtcatccaccagga
ccaaacctatctaccacaaggccaattcagcaagatatgggacatttagaacctccagta
tctgaggatattgacaacatgaagaataataaattggcaaccaatgaaacctcaaactca
catctcatcagtcattctcagaatgatcctatcaaaggaggaaaccattcaaattccaca
ccatactgcacttcccaaaatcagcctattcctttggaccaaccatttctcaactctcag
aattctaccagtcgccaaacccccagtaacccagccaatcctggagctcctaaaaatcca
gagaacagccttattgtcactaatcccacaacccaaaacaatccatccaaaactgccaag
aaatcagaatacacagcagtggagattccacctgccttcccacctccaatcaataatgct
ataatgcaagtcaataagaatgccaatccagagcctctgccaaagaaagaggaagagaaa
aaaaaggaagatgatgatgaaggaggtgaagatgggcccaagcctatgccaccatacagt
tctatgttcatcctctcaaccactaatccttttcggcgcctctgtcattacattgtcaat
ctgcgctactttgagatctgcattctgatggtgattgccatgagcagcattgcattggct
gctgaagatcccgtacagccgagtgctcctcgtaacaatgttcttcgttactttgattat
gtcttcacaggtgtcttcacctttgaaatggttgttaagatgattgacttaggactgatc
cttcatcggggctcttattttcgggatctgtggaatatcttggatttcattgtggtcagt
ggagcactggtggcatttgccttcacaggcagtaaagggaaagacatcaacaccattaaa
tccttacgtgtccttcgtgttctcagaccactcaaaactatcaagcggttgccaaagctc
aaggctgtctttgactgtgtggtgaattcactcaaaaatgtcctcaatattctcattgta
tacatgctgttcatgtttatcttcgctgtggttgctgtccagctctttaagggcaggttc
ttctactgcactgatgaatccaaggagtttgaaaaggactgcagaggagaatatttagtc
tacgagaagaacaatgaagtgaaggccgagagacgagagtggaggaaatatgattttcat
tatgacaatgtgctatgggcactgcttacccttttcactgtgtctacaggagaaggttgg
ccagatgttcttaagcactcagtggatgctacatatgagaatcaggggcccagccctggt
tatcgcatggaaatgtccatcttctatgtggtatattttgtggtcttcccattttttttc
gtcaacatttttgtggccttaatcatcatcactttccaagagcaaggagacaagatgatg
gaggaatacagtctggagaagaatgagcgagcttgcattgattttgctatcagtgccaag
ccactaacccgacacatgcctcaaaacaagcaaagttttcaataccgtatgtggcagttt
gtcgtttcccctccttttgaatacaccattatggccatgattgccctgaacaccattgtc
ttaatgatgaaattctacaatgcaacaagtctttatgataatttattaaggatgttcaac
attgtcttcactgccctgttctccttggaatgtattctgaaaatcattgcctttggagtg
ctgaattatttccgtgatgcctggaatatctttgattttgtcacagttctgggtagcatc
acagacatcttagtgacagagtttggggtaagttcaaaactggtgagcatgacattctgg
gggagggag
DBGET
integrated database retrieval system
