Notechis scutatus (mainland tiger snake): 113419421
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Entry
113419421 CDS
T09026
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113419421 (HELZ)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
113419421 (HELZ)
3'-5' decay
Other 3'-5' decay factors
113419421 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
AAA_22
Mov-10_helical
zf-CCCH_4
AAA_7
Bac_DnaA
AAA_16
MOV-10_Ig-like
Helicase_RecD
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
113419421
NCBI-ProteinID:
XP_026534561
Ensembl:
ENSNSUG00000010167
UniProt:
A0A6J1UUB8
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MKKNYGKADEDCRHVLGEGLDREGDTFRAVLRCVHLKGKLQAVSNALSNSLMGESLQNGM
VTKDLTRLKNLLVETEAAACKIPLVHHVEEVEEGCHDGWQFRPPPRGVTSSEEYTLCKRF
LEQGICRYGAQCTSAHSQDELTEWQKRYASRLIKLKQQKENKQCLGSYMESLIEKWMNSL
SPERVLSECLDGVRVEHNPELSVTVTTKKSHQMWTFALTCKPARMLYRVALLYDAHRPHF
SIMAISAGDSTTQIKQEVPETCQEWVGGKMAQNGTDHSVYKISVAFSTEIFGTFRQTVVF
DFGTEPVLMQRVMIDAASTEDLEYRMNARQQLLTTAKRWDSTSKTIVEFEPNETTELDKS
LLIRYQIPLSADQLFTQSVLDRSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNIKVQLQIV
ASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPITKEKSGLT
QGTKEKVYEAIIEEKTKEYIFLRISKDCCEELNLRADCEMQVELQFQLNRLPLCEMHYAL
DRIKDNGILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIHLPPVLII
GPYGTGKTFTLAQAVKQILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNPQARPLR
VYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQLDLEPG
FFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLD
RLYEHCPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTAR
GEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAE
LRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAMKRKEHLLEDSTEDLDYG
FLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNESLHGITFDQIK
AQLEALELKKTYVLNPLAPEFIPRALRQQHSSNTNKPQQSPPKVKSHHHNHSDHFHTDGI
VQPTASVLIGNPVRAYTPPPPPPPPPGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGN
MVMSVPLPVPWTGYQSRFAVDPRIITHQTAMAYNVNLLQAHGRGSPIPYGLGHHSPVSIG
QQQLHHSEKEQLELNRNSKNEPGAGPEISKIRTPEKNPLEAKQVDLEANPQNRSPELRSS
SSYPNSKFHRKDNLNPRQLNIHLTPPQAQYAVPRGPFQHLAQISRHPYPVPPQPSLLSQQ
QNQLSEQHNQMPPLQSQIVQQHNHLNQQPQPPSSQLSPAFPTGPNQSFFKTPVPHRPHSP
GTDSSVLEQLPPSVLQDVSSPLRPIAQPNLMMPSHLNHFIEENPPGVSVGEPLDRIHGNL
ALETLRQQQARLQQWNEHNAYLSQGNISYSQHHHPHLSHLSQQSMGLHQQPVRANWKLAN
NIEDETEATYSRFQDLLRELSHRDQTENRDLVEMPPPQSRLLQYRQVQPRSPPALLSPTC
NSNHSGHFPNFSESRDLEISNNPAFQQHLPQMYNPPFSVPSEHLTPPSLKYLQPDGSWTY
ANLHQSHLMGQGFHYGIPPLPHRSQPNPFIQIQNHQHPVGQEPFHPLTSRAVSASSLHSL
EEYEPRGPGRPLYQRRMSSSSTQACSEGLNTPPDNVGQCQELQDQSNPSSFNYSPPEWWV
NSSSSAPYQNIPCNGSNRAIPPREQLVPPKAIKSPEEQMKVENIPLSSSFNYNVLQHLGQ
FPPLMPNKQIVESNSNSQPSAGLNKPAMSYASALRAPPKPRPPPEQAKKNSDPLSLFQEL
SLGSSSGSNGFYSYFK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaactatggaaaggcagatgaagactgtaggcatgtattgggagaaggactg
gacagggaaggggatactttccgtgcagtgcttcgctgcgtgcatcttaaagggaagcta
caggctgtttctaacgctctttctaactcactgatgggtgaatcactgcagaatgggatg
gtaactaaagatctgacgaggctgaaaaaccttcttgttgaaacagaggcagcagcttgt
aaaatacccttggtacatcatgtggaagaggtggaagaaggatgtcatgatggctggcaa
tttcgccccccaccccggggagtcacaagtagtgaagaatacacattatgcaaaagattt
ttagagcaaggaatttgcagatatggtgcacagtgtacttcagcacattcccaggacgag
ctgaccgaatggcagaaacgatatgcttcccgcttgataaagttaaaacaacagaaagaa
aacaagcaatgtttgggaagttacatggaatccttaattgaaaaatggatgaattcatta
tctcctgagagagtgctcagtgaatgtcttgatggagtaagagttgaacataatcctgaa
ctatcagttactgtcaccaccaaaaaatcacatcagatgtggacttttgctcttacatgt
aagcctgcaagaatgctgtatcgagtggcactcctgtatgatgcgcatcgtcctcatttt
agtatcatggcaatatcggctggagatagcaccacccaaataaaacaagaagtcccagaa
acctgccaggaatgggttggaggaaagatggcccagaatggaacagatcattcagtatac
aaaatcagcgtagcttttagtacagaaatctttgggacctttcgtcaaactgtggtattt
gactttgggactgaaccagttttgatgcaacgagtgatgattgatgctgcctcaacagaa
gatcttgaataccggatgaatgcacggcagcaactgttaaccacagccaagcgttgggat
tccacttccaagacaattgtagaatttgagccaaacgagactactgaattggataagagc
cttctgatcagatatcagatccctctgtctgctgaccagctatttacacagtctgtcttg
gatagatcattgaccaagagtaattatcagtcacggctacatgatctcctttatattgag
gaaatagcacagtataaagaagtcagcaagtttaacatcaaagtgcagttgcagattgta
gcaagcttcatgctgactggtgtttctgggggtgcaaagtatgcccaaaatggacaactt
tttgggcggtttaaactcactgaaaccctttccgaagacactttggcagggcgactggtg
atgaccaaagtcaatgctgtttatttattaccgatcactaaagagaagtcagggctgacc
caaggaaccaaagagaaagtatacgaagcaattattgaagaaaaaacaaaggaatatatc
tttctgagaatatccaaggactgctgtgaagagcttaaccttcgagcagattgtgaaatg
caggttgagcttcagtttcaattaaaccgcttacccctctgtgaaatgcattatgccttg
gataggatcaaggacaatggtatcctgtttccagatgtcagcatgacccccacaatacct
tggagtcccaacaggcagtgggatgagcagttggatcctaggctcaatgcaaagcagaag
gaggctgttctggccatcacaactccactgtcaattcatctgcctccagtccttattatt
ggtccttacgggacgggcaaaactttcactttggctcaggcagtcaaacaaattctccaa
cagcaggacactagcaggattctcatttgcacccattctaatagtgctgctgatctctac
ataaaggattatttacatccatatgtagaagcaggcaatccccaggcgagacctctcagg
gtttatttcagaaatcgctgggtaaaaactgtccacccagttgtgcatcagtactgtttg
atttcaagcacacattccacctttcagatgcctcagaaagaagacattcttaaacaacga
gtagtagtggttactttgaatacttcacaatatctgtgtcagctagatcttgagcctggg
ttttttacacatattctgttggatgaagctgcacaggcaatggagtgtgagactattatg
cctttagcactagcaaataaaaatacaagaattgtcttggctggagaccatatgcagctt
agtccttttgtgtacagtgaatttgccagagagagaaatcttcatgtttcattgcttgat
cgtctttatgaacattgccctgcagaatttccatgcaggatcttgctgtgtgagaactat
cgctcccatgaagctatcatcaattatacttctgagcttttctatgagggcaaattgatg
gccagtggaaaacagcctgcacacaaagatttttatcctctgacattcttcacagcacga
ggagaagatgtgcaagaaaagaacagcactgctttttacaataatgcagaggtatttgaa
gtagttgaacgtgttgaagaattaaggaggaagtggccagtcgcctggggaaagttggac
gatggcagcataggtgttgtaacaccatatgctgatcaagtgttccgaattcgggcagaa
cttcggaaaaaaagattgtctgatgtcagtgttgaaagagtgttaaatgttcagggaaag
cagtttcgggtgttatttctcagcacagtacgaacccggcacacttgcaaacacaagcaa
acagcgatgaaacggaaggaacatttattggaagattcaacagaggacttagattatggt
tttctgtccaattacaaacttcttaatacagccattacaagagcacagtccctagtagct
gtggtgggcgatccaattgctttatgttccattggaagatgcaggaaattttgggaaaga
tttattgccctgtgtcatgataatgaaagtcttcacggtatcacatttgatcaaatcaag
gctcaattggaagctctggaattaaagaaaacctatgtattgaatccgctggctcctgag
tttattccacgggctctgcgacagcagcattcatcaaacaccaataaaccacagcaatca
ccaccaaaggtaaaaagccatcatcataaccatagtgaccattttcacactgatggaatt
gttcagccaactgcttctgtcttaattggaaatcctgtcagagcttataccccaccaccg
ccaccccctcctcctcctgggcctcatcctaacttggggaagtctcctagtcctgtacag
cggatagatcctcacactgggacaagcattctttacgtacctgctgtttacggaggaaat
atggtcatgtctgtgcctttacctgtaccatggacagggtatcagagtagatttgcagtt
gatcctcgaatcattactcatcaaacagccatggcatataatgtgaatcttttacaagca
catggacgtgggtcccccattccctatggtcttggacatcattcaccagttagtatagga
caacagcagcttcatcattcagagaaagaacagcttgaactgaatcgaaacagcaaaaat
gagcctggtgctggacctgaaatcagtaaaattcggacacctgagaaaaaccccttagaa
gccaaacaggttgacttagaagcaaatccccaaaatagaagccctgaattgcgttccagt
tcttcttatcctaattctaaatttcaccgcaaagataatcttaaccccagacagctgaac
attcacctcactcctccccaagcccagtatgctgttcctagaggccctttccagcactta
gcccaaatttcaaggcatccatatcctgtgccaccgcaaccgagcctcttaagtcaacaa
cagaatcaattgtctgaacaacataaccaaatgcctcctctgcagagccagatagtccag
caacacaatcatttgaatcagcagccgcaaccaccatcttcacagctctctcctgccttt
ccaactggccccaaccagtctttctttaaaactccagttccacatagacctcattcccct
ggtacagacagttcagttttagaacagctccctccatctgtgctgcaagatgtcagtagc
cccctgagacccattgcgcagcctaacctcatgatgccatcccatttgaaccacttcatt
gaagagaatcctccaggagtgtctgtgggagaaccattagatcgtattcatggaaattta
gctttggaaaccttaaggcaacagcaagcaagactacagcaatggaatgagcataacgcc
tatctcagtcagggcaatatttcttattctcaacatcatcaccctcacttatcccacctt
tctcagcagtccatgggactgcatcaacagccagtcagggcaaactggaaacttgccaac
aatattgaagacgaaacagaggcaacatattcaagattccaggatttgcttcgagagctc
tcccatcgtgatcaaactgaaaatagggacctcgttgaaatgccgccacctcaatcaaga
cttttgcaatatagacaagtgcagcccagaagtccaccagcactcctctctcctacatgc
aactcaaaccacagtggccactttcctaatttctctgagagtagagaccttgaaatctct
aacaatccagcatttcagcagcatttgcctcaaatgtacaatccccctttctcagtgcca
tctgaacacctgaccccaccttccttgaaatacctgcagccagatggatcatggacctat
gctaatttacaccagagtcatctcatggggcaaggctttcattatggtatacctccattg
cctcatagatcacaaccgaacccttttatacaaatacaaaatcatcagcacccagttggt
caggaaccatttcaccccctcacttcacgagcagtatctgcttcttctctgcatagctta
gaagagtatgaaccaagaggacccggcaggccattgtaccaaagaagaatgtcgtctagt
tcaacccaggcttgttctgaaggtttaaatactcctccagataatgttggacagtgtcaa
gagcttcaggaccagagtaacccatcctctttcaattattctcccccggaatggtgggtc
aactcttcttcatcagccccctatcagaacattccatgcaatggatccaatagagcaatc
ccaccaagagaacagttagttcctccgaaggctatcaaatcccctgaggagcagatgaag
gttgaaaacatcccattgtccagttcttttaactacaatgtactccagcatctgggccag
ttcccacccctcatgcccaacaagcagattgtggaatccaacagcaacagccagcccagt
gctgggttgaacaaacctgccatgtcctacgcaagtgctctgagggctcctcccaagccc
agaccccctcctgagcaggcaaaaaagaatagcgaccccttgtctctgtttcaggaactt
agcctaggtagttcatcaggtagcaatggcttctactcctattttaaataa
DBGET
integrated database retrieval system
