Notechis scutatus (mainland tiger snake): 113422996
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Entry
113422996 CDS
T09026
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113422996 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113422996 (CNOT1)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113422996 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113422996 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
CNOT1_1st
DUF3819
Motif
Other DBs
NCBI-GeneID:
113422996
NCBI-ProteinID:
XP_026539988
Ensembl:
ENSNSUG00000006457
UniProt:
A0A6J1VHE1
LinkDB
All DBs
Position
Unknown
AA seq
2265 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLQVFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIEAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGRDKNDGTQTHTWNVEVLIDVLKELNPTLNFKEVTYE
LDHPGFQIRDSKGLQIVVFGVQRGLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEIFC
FADYPCHTVSTEILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGPTVPHTQSMPGFPPNLSSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVG
GLTTGSLGIGTGNLGLPAVNNDPFVPRKLNTSGLNQPTFQQSKVKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAPAKTPLAGQVSTVVTTATTTSTVAKTAIAPVGRVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINDLKPGSLLKDKDRLKTLDEQLSAPK
KDIKQAEELPPITTTTSELRQNCTRFRNDTDEEQTGSSATASSLEYQAASPQQREMMEQA
AAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAE
RMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDSSQPTGILAQPMKQAWATDDVAQI
YDKCMAELEQHLQSVPHTLAMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLD
ATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELL
IRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHMTEADLFHTIETL
MRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREK
AEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISY
RAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVV
GVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKA
PGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQIL
YKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLK
VDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYN
IQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIA
NQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIK
NPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
actaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaaccggcacgga
cctgaagcagacaggcatttgctacgctgtctcttttctcatgtggatttcagtggcgat
ggtaaaagtagcggtaaagatttccaccagactcagtttctgatccaggagtgtgcatca
ttgattacaaagccaaacttcatttcaacactgtcctatgctattgaaaatccattgcat
tatcaaaagagtcttaagccatcaccccatctattcacccagctgagcaaagtgatcaaa
ttaagcaaagttcaagaggttatttttggccttgctttgttgaactctttcaatcctgat
ctacaagtttttgctgctcagtttattaaacagaagcttcctgatcttctgcgctcatat
attgacgcagacgtcagtggtaatcaagaaggtggcttccaagatattgcaatagaagtc
ttgcacctcctcctctcccatctactttttgggcagaagggagcctttggggttggacag
gaacaaatcgaggctttcctcaaaacattgcgcagagatttccctcaggagcgttgccct
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgactctggagggatagcaaaaaccatgatggagagttctcttgcagactttatgcag
gaagttggctatggcttttgtacaagcgtggaagaatgtcgcagtatcatcacacaattt
ggtgttggggaggttacagctgcccaggttgccagggttttgggaatgatggctcgcaca
cactctggattgacagatggcattccattacagtctatttctgcccctggaagtggaatt
tggagtgatggaagagataaaaatgatggaacacagactcatacatggaatgttgaagtt
ttgattgatgtgcttaaagaactgaacccaaccttaaatttcaaggaagtaacctatgag
ctggaccaccctggatttcaaattcgtgatagcaagggcctgcaaattgtagtctttgga
gttcagcgaggattaggactggaggtttttccagttgatctaatatacagaccttggaaa
catgctgaaggccagctctcattcattcagtattccctcattaacccagagatcttctgt
tttgctgactatccctgtcatactgtttccacggagatcttgaaagcaccacctgaggat
gataatcgagaaattgccacatggaagagcctagatttgattgagtccctgttgcggttg
gcagaggtgggccagtatgaacaagtcaagcagctcttcagtttccctatcaagcactgt
ccagatatgttggtcttggctttgctacagatcaacacttcttggcatactttgcggcat
gaactcatctccacccttatgcccattttccttggcaaccacccaaattctgctatcatc
ttgcattatgcatggcacgggcagggtcagtccccttcaattcgtcagctcatcatgcat
gctatggcagaatggtacatgagaggagaacagtatgaccaagcaaaattatcacgtatc
ctagatgtggcccaagacttgaaggcattgtctatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcccttgcctctcggcgggaatacctcaaactagacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaagcttgtatgacttttttg
aagagaagatgtccctctatcttgggtggtcttgctccagagaaagatcagcccaaaagt
gctcaacttccaccagagactctagcaacaatgctagcttgccttcaggcttgtgctgga
agtgtatcgcaagagctgtcggaaactattctcaccatggtagccaactgcagcaatgta
gtgaacaaagccagacagccaccgcctggcgtgatgcccaaaggacgtccccccagtgct
agcagcctggatgccatctcccctgtgcagattgatccgcttgctgctgggatggcatct
ctcagtttaggtggcccaacggttcctcatacccagagtatgcctggatttcctccaaac
ttgagttctgcttttagtactcctcagtcaccagcaaaagcatttccaccactttctaca
caaaaccagaacacaccttttagtgggattggtgggctctcttcacagcttccagtaggt
ggtctcacaaccggtagtctgggtattggaactggcaaccttggcctccctgcagtgaat
aatgatccatttgtgccaagaaagctgaacacatcaggattgaaccaacccacattccag
cagagtaaggtgaaaccttctgacttatctcaggtatggccagaggctaatcagcacttt
agcaaagagattgatgatgaagccaacagctattttcagcgtatttataatcacccaccc
catcccaccatgtctgtagatgaggtgttagaaatgctacagagatttaaggactctaac
attaaacgggagcgagaagtatttaactgtatgctgaggaatttatttgaagaatatcgt
tttttcccgcaatatcctgataaagagctccacataacagcctgcctcttcggtgggata
atcgagaagggattggtgacctatatggccctgggcctggccttgcgctacgtgcttgaa
gccttacgaaagccttttacatccaaaatgtactattttggaattgctgcactagataga
tttaaaaatagattgaaggactaccctcaatattgtcaacatctggcatctattagtcac
tttatacagttccctcatcacctgcaggagtacattgaatatggacagcagtcgagagat
cctcctgtgaagatgcaggggtccatcaccacccctggaagtattgccctggcccaggcc
caggcccaggcccaggctccagcaaagacacctctcgctggccaggttagcactgtagtc
accactgccaccaccaccagcactgtcgcaaagacagccattgcgcctgtgggtcgagtc
agcttcaagaaagatgtgccaccttctattaatacaacaaacattgatactctgctagtg
gccacagatcaaacagagaggattgtagaaccacctgaaaatgttcaggaaaagattgct
tttatctttaataatttgtctcaatccaacatgactcagaaggttgaggaactgaaggaa
actgtgaaagaagaattcatgccttgggtttcacagtatcttgtgatgaagagagttagc
attgagccaaacttccatagtctttattcaaatttccttgacactcttaaaaatccagaa
tttaataaaatggttttgaatgaaacatacagaaatatcaaggtgctgcttacatcggat
aaagctgctgccaacttctcagaccgttcgttgctgaagaacctgggtcactggctgggg
atgataacactggcaaagaataagcccatcttgcacacggatttggatgtcaaatctttg
ctgctagaagcttatgtaaaaggacagcaggaattgttatacgttgtgccatttgttgct
aaagtattggaatccagcgtaagaagcgtggttttcaggcccccaaatccatggaccatg
gcaatcatgaatgttcttgcagaacttcatcaggaacatgacttaaagctgaatctgaag
tttgaaattgaagtgctctgtaaaaacctggcccttgacatcaatgatctaaaacctggt
agtcttctaaaagacaaggaccggttgaaaaccctggatgaacaattatctgctccaaaa
aaggatataaaacaagcagaagaactaccaccaattactactaccacaagtgagctcagg
caaaactgcacacgattccgcaacgacaccgacgaggaacaaactggaagttctgctaca
gcttctagtcttgaataccaggcagcttcaccacagcagagggagatgatggaacaggct
gcagcccagttggctcaagataactgtgagttggcctgctgcttcattcagaaaacagcg
gtggaaaaagcaggtcctgaaatggacaagaggctggcaactgaatttgagctccgaaaa
catgcccggcaagaagggcgcaggtactgtgatcctgtggttttgacttaccaagcagag
cggatgccagagcagatcagactgaaggttggtggtgtggacccaaagcagctagctgta
tatgaagaatttgcacggaatgttcctggtttcctgccaacaaatgattcaagtcaacca
acaggaatcctggcccagcctatgaagcaagcctgggcaactgatgacgtggcacagatt
tatgataaatgcatggcagagctagagcagcatctgcagtctgttccccacacgttggcc
atgaatccccagacacaagctctgcggagccttttggaggccgtagttgtggctcgtaat
tctcgagatgctattgcagcccttggattgctacagaaggcggttgaaggattattagat
gctacaagtggtgcagatgcagacctccttctccgataccgtgaatgtcatttgcttgta
ttaaaagccttgcaagacggccgtgcctatggctctccctggtgtaataagcagataaca
agatgtctgattgagtgtcgagatgaatataaatacaacgtagaagcagtagagctcctg
attcgtaaccatctagttaacatgcagcagtacgaccttcacctagctcagtccatggag
aacggcttgaactacatggcagtggcgtttgcaatgcagctggtgaagatcctgctcgtg
gacgagagaagtgtggctcacatgacagaagcagatttgttccataccattgaaactctg
atgagaataaatgctcactccagaggaaatgctccagaagggttgccacagctaatggaa
gtggtacgatccaactatgaagccatgattgatcgtgctcatggcggacccaactttatg
atgcattctgggatctctcaagcctcagaatatgatgatcctccaggtctgagggagaag
gcagagtatctcctgagagagtgggtgaatctttaccattctgcagctgctggccgggac
agcaccaaagccttctctgcatttgttggacagatgcatcaacaaggaatcctaaaaact
gatgacttaatcacaagattcttccgtctttgcactgaaatgtgtgttgaaatcagttat
cgtgctcaggctgagcagcagcacaaccctgctgcaaaccccactatgatccgtgccaag
tgttatcacaacctggatgcctttgtgcgtcttattgcactgttggtgaagcactctgga
gaggctaccaatacagtaacaaaaatcaacctgcttaataaggttcttgggatagtggtg
ggagtccttttgcaggatcatgatgttcgccagagtgaatttcaacaacttccctaccac
cgcatcttcatcatgttactgttagaattaaatgctcctgaacatgtcctggaaactatc
aactttcagaccctcacagctttctgcaatacatttcacatcctgcgacctacaaaagct
ccaggttttgtttatgcttggttagaactgatctctcatcggatatttattgcaaggatg
ctggcacatacaccacagcagaagggttggcccatgtatgcacaactcttgattgacctg
tttaaatatttggctcctttcctgagaaatgtggaacttgccaagcctatgcaaattttg
tacaagggaacactgcgtgtgttactggtattattacacgatttcccagaattcctttgt
gattaccactatggattttgtgatgtgattcctccaaactgtattcagctaaggaatctg
attttgagtgcctttccacgtaatatgaggcttcctgaccccttcactcccaaccttaag
gttgacatgctgagcgagatcaatattgctccacggatcctcaccaattttactggtgtg
atgccacctcagttcaagaaggatttggattcctatctcaaaactcgttctccagtcacg
ttcctctccgacttgcgcagcaacttgcaggtatcaaatgagcctggcaatcgttacaat
attcagctgatcaatgccttggtgctttatgttggtacacaagcgattgcacacattcat
aataagggcagcacaccatccatgagcaccatcacccattcagcccacatggacatcttc
cagaaccttgctgtcgatctggacacagaaggtcggtacctcttcctgaatgcgattgcc
aatcagttgcgatatcccaacagccacacgcactacttcagctgcaccatgctttacttg
tttgcagaagccaatacagaagctattcaagagcagatcaccagggttttgttagaacga
ctgattgtaaataggcctcatccctggggcctcttaatcaccttcattgaattgattaaa
aatccagcatttaaattctggaaccatgagtttgttcactgtgctccagaaattgaaaag
ctgttccagtcagtcgcacagtgttgtatggggcagaaacaggcacagcaagtaatggaa
ggaactggagccagctag
DBGET
integrated database retrieval system
