Neomonachus schauinslandi (Hawaiian monk seal): 110570750
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Entry
110570750 CDS
T08474
Symbol
COL6A5
Name
(RefSeq) collagen alpha-5(VI) chain
KO
K06238
collagen type VI alpha
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04151
PI3K-Akt signaling pathway
nsu04510
Focal adhesion
nsu04512
ECM-receptor interaction
nsu04518
Integrin signaling
nsu04820
Cytoskeleton in muscle cells
nsu04974
Protein digestion and absorption
nsu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110570750 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110570750 (COL6A5)
04518 Integrin signaling
110570750 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110570750 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110570750 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110570750 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110570750 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsu04147
]
110570750 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
nsu00536
]
110570750 (COL6A5)
Exosome [BR:
nsu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110570750 (COL6A5)
Glycosaminoglycan binding proteins [BR:
nsu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110570750 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
110570750 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
Copine
Motif
Other DBs
NCBI-GeneID:
110570750
NCBI-ProteinID:
XP_021534463
UniProt:
A0A2Y9G6E6
LinkDB
All DBs
Position
1:complement(128197222..128284474)
Genome browser
AA seq
2612 aa
AA seq
DB search
MKILLIIFVLILWTETLADQSPGPGPEYADVVFLVDSSDHLGTKSFPLVKAFINKMISSL
PIAAHKYRVALGQYSDQLHSEFQLSTFKSGNPMLNHLKKNFNFIGGSLRIGNALREAHGT
YFSAPASRRDRKQFPPILVVLASAESEDDVEEASKALREDGVRIVSVGLQDASEEELKAM
ATAQFHVKLRSVRDLGAFSQNMTQIIKDATQYRDGAAPPDIEVPFPVACRKDSLADVMFL
VDESVGTRQNLRNLQNFLRNIATSMDVRYSCTRLGLMSYSDRAKTISFLNSSTTQYEFEE
QIQKLFVQAGKSNAGAAIEKMRLEAFSESSGSRRAQGVPQIAVLVTHRPSADEVRDAAIQ
LRLQDVTVFGVNTQGANNTQLEEIVSYPPRQMASMLQSYADLEAYSKNFQKKLHNEIWSQ
ISTHAEQMDLDRTGCLDTKEADIYFLIDGSTSIQRIHFEQIKEFMLAVTGMFSIGPDQVQ
VGAVQYSHKMRVEIYISDSSNDVNLRNAILNIEQLQGNTHTGEALDFMLSRIKEDRKHRT
RKVPCYLIVLTDGRSTDEVLEPAERLRAEQVTIYAVGIGEANKAQLQQIAGEEERVSFGQ
NFDSLRSIKNEVVHRICTEKGCEDMKADIMFLVDSSGSIGHENFGKMKTFMKNLVAKIQI
GPDRTHIGVIQFSDKTQEEFQLNKYFTQTEISDSIDRMSLINKNTLTGNALTSVDQYFTP
AKGGRVMVKKFLILITDGEAQDPVREPAKFLRDKGVVIFSVGVFGANRMQLEEISGDGNL
VFHVENFDDLKAIESKLIFRVCALHDCKNIKVLDIVFVLDHSGSINTQEQESMMDLTIHL
VKKADVGSDRVRIGALKYSDYPEVLFHLRKYSNRSTVTEHLRRHRNTGGSTFTARALDYT
NIMFTEEYGSRIQQNVKQMLIIITDGVSHDRNLLNETALKLRNKGIDIYAVGVGQADQLE
LEAMAGSKSNTFHVDNFNKLKDIYLPLQEGMCSNAREPCDIQEADVVFFCDGSDMVSHSE
FVTMTTFVSDLIDNFDIQNQRIKIGLAQFGSGFQKIVQLKNSLTIPELKTQIQTVTKSKG
FPRIGQALKKVKVMFDPSSGGRRNAGVPQTLVVITSRDPYYDVADEVKILRNLGICVLVL
GIGDVHKEQLLPITGNSEKIITLQDFNKLMTEDVKKRMAREICQSCGKTNCFMDIVVGFD
ISTHLLGQPLFHGHPRLRSYLPGILEDITSIRRVSCGAGTEVQVNVAFKVNNDQEFPAKF
QIYRKAIFDSLLQVTVDGPTHLNAQFLQSLWDTFKDRSKSQGQVLLIFSDGLGGESEIML
EDQSARLREAGLDALLVVSLNTTAHDEFSSFEFGKGFDYRTHLTIGMRELGKMLSQYLGS
IAEKTCCCTFCKCSGAPGPHGSRGLLATKGSPGLKGSRGHWGEDGDPGRRGEIGPPGDKG
ITGCPGEQGQKGAKGFSGHKGEQGEDGIDGLDGEEGFHGFPGEKGEKGDPGSQGSPGSRG
PPGGYGEKGFPGDPGNPGQNSNIKGQKGSKGEQGRQGRTGQKGTPGNPNSRGSRGREGRR
GPPGVSGEPGDPGPQGTQGADGLQGPQGLNGIPGKEGEKGSEGHKGPQGSSGPVGAKGNI
GSPGPSGKKGEPGILGDPGPVGQAGQRGRQGDYGIPGYGHMGRKGIKGPRGFPGDMGQKG
AVGDPGIPGGPGPKGFRGLTLTVGLKGEEGPPGPPGPPGQRGMKGMVGKPVYSQCDLIQF
MRDHSPCWKEKCPVYPTELVFALDQSYGISEQRFNEMREIIKSIVNDLNIRESNCPVGAR
VVVVSYDSSTSYLIRGSDYRNKKHLLQLISQMKYQPPTEARDIGNAMRFVARNVFKRTYA
GANVRKVAVFFGNGQAASQSSIITATMEFSALDISPAVFALNERIFLEAFEFDNTGTFQV
IPVSPNGEYEPLEKFRRCTLCYDKCFPSDCIKEIFLPENSYMDVAFLLDNSQTIANEEFK
AVKTLVSSMIDNFHIASDPRISDFGDRIALLSYSPWDSSRRKKGVVKTEFEFTTYSDGVL
MKRHIQSSLQQLKGEATIGHTLLWAVENLFPQAPNLRKHKVIFVISAGEYHERKEFLKKV
ALRAKCQGYVIFVISLGSAYKEDMEELASYPLDHHLIQLGRIHKPDLDYITKFIKPIVYS
IRRGFNEYPPPVLENACRLISRGEAYQNKDLLFTPEPYEISSGENSFIGQELSAGKDSSF
MWEDNGSNHLVYIPSHMLMPQELTITYEKGQDSEEIASLTSGHENHDRKEEPGLTNEPGD
TSLQEYYMDVAFLIDASRRIGNDEFKEVKAFLISVLDYFHIAPDPLTSMLGDRVAVLSYS
PPGYMPNSEECPVYLEFDLVTYSSIFQMKHHLQDSFQQLSGDVFIGHALQWTVDNVFVGT
PNLRKNKVIFVISAGETNPLDKEVLRNVALRAKCQGYSIFVFSFGPIHNDKELEELASHP
LDHHLVQLGRTHKPDLNYITKFVKPFVHLIRRAINKYPPADLRPKCVNITSPNPENVGSG
NNVFFIPEVYKIETGNSELFDEFDSQEQHFFVLGNNPSNGSETTTDLIQKLYMLFSTGEL
MNDKEEAHSEEMPALADGKQDKKDKEMEAADI
NT seq
7839 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgctaattatattcgtcttaatcctttggactgaaacattggcagatcag
agtccagggccgggccctgagtatgcagatgtcgtgtttctggtggacagctctgatcac
ctgggaactaagtccttcccgcttgtgaaagcattcatcaacaaaatgatcagcagtctg
cccatagcggcccacaagtaccgcgtggccctgggccagtacagcgaccagctccacagt
gagttccagctgagcaccttcaagagcgggaaccccatgctgaaccacctcaagaagaac
ttcaacttcattggcggctccctgaggattggcaacgctctccgggaggcccacgggacc
tacttctctgcaccggccagcaggagggacaggaagcagtttcccccgattctggtggtc
ctggcttccgcggagtctgaggatgacgtggaagaggcctccaaggccctgcgggaagac
ggggtgaggatcgtctctgtggggctgcaggatgcttctgaggaggagctgaaggccatg
gccaccgctcagttccatgtcaagctccggtcggtcagggacctcggggcgttttcccaa
aacatgacacagatcatcaaggacgccacccagtacagggatggagccgcccctcctgat
atagaagttcccttcccagtggcctgtcggaaagattcattagctgacgtcatgttccta
gtggatgagtcagttggcaccagacaaaacttaaggaacctgcagaatttcctgaggaac
attgccacctccatggatgtgaggtacagctgcacacgccttggacttatgagttacagt
gatagagccaagactatttcctttctaaattcaagcacaacccagtatgaatttgaggag
caaatccagaagctttttgtccaggctgggaaatccaatgctggggctgccattgagaag
atgaggctagaagccttctcagagtcaagtggcagcagaagggcccagggagtgcctcag
atcgcagtcttggtcactcacagaccatcagctgatgaagtgcgtgatgccgcaatacaa
cttcggctgcaggatgtgactgtatttggtgtgaacacccaaggggctaacaacacccag
ttagaagaaatagtgtcttaccctccgagacaaatggcttccatgctccagtcctatgca
gacttggaagcttatagtaaaaacttccagaaaaagctccacaatgaaatttggtcccaa
atttctactcatgctgagcaaatggaccttgacagaacaggctgtctagatacaaaagag
gctgatatctatttcctcattgatggctcaaccagcatacagagaatacactttgagcaa
atcaaggaatttatgttggctgtgacaggaatgttcagcattggcccagaccaagtccaa
gttggagctgtgcagtattcacataagatgagagtggagatttatatcagtgacagttct
aatgatgtgaacttaagaaatgctattttgaacattgagcaactccaaggcaacacccat
actggggaggccctggatttcatgctgtcaagaataaaagaggataggaagcataggaca
cgcaaggttccctgttacctcattgtgctgactgatgggaggtccacagatgaagtcctg
gagcctgctgagagattaagggctgagcaagtcaccatttatgcagttggcattggggag
gctaacaaagcacaactccaacaaattgctggggaagaagaaagggttagctttgggcag
aactttgattctttaagaagcataaaaaatgaagttgttcacagaatttgcactgaaaaa
ggatgtgaagacatgaaggctgacatcatgtttctggtggacagttctggcagtatagga
catgaaaattttggaaaaatgaaaaccttcatgaaaaacctagtagctaagattcagatt
ggtccagacagaactcatattggtgtcattcagttcagtgataaaactcaggaagagttc
cagcttaataaatactttacacagaccgaaatttctgattcaatagacagaatgtctctc
atcaacaagaacactttgaccggaaatgcactaacttctgtagatcaatacttcaccccc
gccaaggggggccgtgttatggtcaaaaagtttcttatcctcatcacggatggagaagca
caagatcctgtgagagagcctgctaaatttcttcgggacaaaggtgtggtcatcttctct
gtgggggtgtttggcgccaataggatgcagctggaggagatcagtggggatggcaacctc
gtcttccatgttgagaactttgatgatctaaaggcaatagaaagcaaactcatttttcgt
gtatgtgctctccatgattgtaaaaatattaaagtgttggacattgtgtttgtgctggat
cattcaggcagcataaacacacaagagcaagaaagcatgatggatctaactatccatttg
gtgaagaaagcagatgttggcagcgaccgagttcggattggagctctcaaatactcggac
tatcctgaggttcttttccaccttaggaaatactcaaacagatccacagtcactgagcac
ctgaggaggcacaggaacaccggagggagtacctttactgccagggctctagattacaca
aacataatgtttacggaggaatatggcagccgcatccagcaaaacgtgaagcagatgctg
atcatcatcaccgatggggtgtcccatgaccgaaatctgctcaatgagacagcactgaaa
ttaagaaacaaaggcattgatatctacgcagtgggtgtaggacaggccgaccaacttgaa
cttgaggctatggcagggagtaaaagcaatacattccatgtagataatttcaacaaactg
aaagatatttacctgcctctacaagaaggaatgtgtagcaatgcacgtgagccgtgtgac
attcaagaagctgatgtggttttcttttgtgatggctctgacatggtctcccactcagag
tttgttaccatgacaactttcgtgtcagacttaattgataattttgacattcagaaccag
agaataaaaattgggttggctcaatttgggagtggcttccaaaaaattgtccagttgaaa
aactctctgactataccggagttgaagactcaaattcaaaccgtcaccaagagcaagggg
tttccgcgaattggccaggcccttaaaaaagtgaaggtcatgtttgatccatcttctggt
gggagaagaaacgctggtgtccctcaaactttggttgttatcacatccagagatccctac
tatgatgtggcagatgaagtgaaaatcctgagaaacctcggaatttgtgtcctggttttg
ggcataggggatgttcataaggaacaacttctgccaataacaggaaattctgaaaaaata
atcaccctccaagactttaataaattaatgactgaggatgtgaaaaaaagaatggctcgt
gaaatctgccagagctgcgggaaaaccaattgctttatggacatagtggtcgggtttgac
atttccactcacctgctggggcagccgctgttccatggccacccccggctgagatcctac
ctcccaggcatcttagaggacatcacctccatcaggagggtcagctgtggagcaggcaca
gaggtgcaggtgaatgtggccttcaaggtgaacaatgaccaagaattccctgccaagttc
caaatctaccggaaagcaatatttgacagcctgctgcaagtcactgtcgatggaccaact
catctgaatgcacagttcctgcagtcgctgtgggatacatttaaggatagatctaaatcc
caaggacaggtgctactcatcttttcagatggtcttgggggtgaaagtgagataatgctt
gaagatcaatcggccaggctcagagaagcaggacttgatgctctgctggtggtgtcccta
aacacgactgcccacgatgagttttccagctttgaatttggaaagggatttgattacagg
actcacctgaccattggcatgagagaactgggcaagatgctgtcacagtacctgggaagc
attgcagagaagacttgctgctgcacattttgcaagtgttcgggggctccaggtcctcat
ggatcccgaggactactagccacgaagggttctccaggtctgaaaggcagcagaggacac
tggggagaggacggagaccccggaagacgaggagaaattggacccccaggagataaaggg
attacaggatgtccaggggagcaaggtcaaaagggagccaaaggattttctggacataag
ggagaacaaggagaggatgggattgacggactggatggggaagagggctttcatggattt
cctggagaaaagggagaaaaaggtgatccaggatctcagggcagcccaggttccagaggc
ccccctgggggatatggggagaagggctttccaggagatcctggcaatccaggacaaaac
agtaacatcaaaggacaaaagggctccaaaggagaacaaggaagacaaggtagaactgga
cagaaagggacaccaggcaatcctaattccagaggaagtaggggaagggaaggccgaagg
gggcccccaggtgtctcaggggagccgggagatcctggacctcaagggacccagggagct
gacggattacaaggcccacaggggttaaatggaattcccggcaaggaaggagagaaggga
agcgaggggcataaaggacctcagggctcttctgggccagtgggagctaaagggaacatt
ggaagtcctgggccttcagggaaaaaaggagaacctggaattcttggagatccagggcca
gtggggcaagccggacagagaggaagacagggagattatggcatcccaggctatggtcat
atgggacgaaaaggaataaagggcccaagaggtttccctggagatatggggcaaaagggt
gctgttggtgatcctggaattcctgggggtcctggacccaaaggatttaggggattaaca
ctcactgtaggcctgaaaggtgaagagggacctccaggacccccaggccctcctggacag
agaggcatgaaaggcatggtggggaagcctgtatattcccaatgtgatctgatccagttc
atgagggaccatagtccttgttggaaagaaaagtgtccagtgtacccaacagagctggta
tttgccttggaccagtcctatggtatctccgaacagagatttaatgaaatgagggaaatc
atcaaatccattgtcaatgaccttaacatcagagaaagtaactgccctgtgggagcaaga
gttgttgtagtttcctatgactcaagtaccagctacctcatccgtgggtcagactaccgt
aacaagaagcacctcctccagcttatttcccaaatgaaatatcaaccccccacagaagcc
cgagacattggtaatgcaatgaggtttgtggcccggaacgttttcaagcggacatatgca
ggagccaacgtgaggaaagttgctgtgtttttcggcaatggacaagcggccagtcagtca
tccatcatcaccgccaccatggagttcagtgccctagatatcagtccggcagtctttgct
cttaatgaaaggattttccttgaggcttttgagtttgacaacactggaacatttcaggtg
atcccagtttctccaaatggggagtatgagccattagaaaaatttcgacgctgtacactt
tgctatgataaatgttttccaagtgattgcatcaaagagatttttttacctgaaaattca
tacatggatgtagccttcctcttagacaattctcagactatagcaaatgaggagtttaag
gctgtgaaaaccttggtgagctctatgatcgacaacttccatattgcatcagaccctaga
atctctgactttggtgataggattgccttgttgagctattctccttgggatagttctagg
agaaagaagggtgtggtgaaaacagagtttgaatttacaacttacagtgacggagtccta
atgaagaggcacatccagtcttccctccaacagctaaaaggagaagccaccattggccat
accctactatgggctgtggagaacctcttcccacaagcaccaaacttgagaaaacacaag
gtcatttttgtgatctcagctggagaatatcatgagagaaaggaattcttaaagaaggtg
gctctgagggccaaatgtcaaggctatgtcatatttgtgatttccctgggctctgcatat
aaggaggacatggaggagttagccagctacccacttgatcaccatctgatacagcttggg
agaattcataaaccagatctggattatattacgaagtttataaagccaattgtttattca
atcagacgaggattcaatgagtacccaccaccagtgcttgagaatgcctgtagactcatc
tcaagaggagaggcttatcaaaataaggatcttctatttactcctgagccatatgagatt
tcttcaggagagaacagcttcattggccaggaattaagtgctgggaaagactcgtccttc
atgtgggaggacaatggaagtaaccatttggtttacataccaagccacatgcttatgcca
caagaattaacgatcacatatgaaaaaggtcaggattctgaagaaattgcaagtttaact
tctggacatgaaaaccatgacagaaaagaagaaccaggtcttactaatgaacctggagat
acctctcttcaagaatattacatggatgtggctttcctcatagatgcttcccgaagaata
ggaaatgatgagtttaaggaagtgaaagcttttctaatctcagtgcttgattactttcac
attgccccagacccactgacctccatgttaggagacagagtggcagtcctgagctattct
cctccaggctatatgcccaacagtgaagaatgccctgtctacctggaatttgatttggtt
acttatagcagtatattccaaatgaaacatcatctccaagactctttccagcagctcagt
ggagatgtttttattggccatgctctgcagtggacagttgacaatgtgtttgtaggaacc
cccaacctgaggaaaaacaaagttatctttgttatatctgctggcgaaaccaacccctta
gacaaggaagtcttaagaaatgtagcactgagagccaagtgtcagggctactccatattt
gtgttttcctttggtcctatacacaatgacaaggaattagaagaattagccagccaccca
ctggatcatcacttagtccagcttggcagaacccacaagccagatttgaactatatcacc
aagtttgtcaagccatttgttcatttaatcagacgtgccatcaacaaatatccccctgca
gatctgagacccaagtgtgttaacatcacctctcccaatccagagaacgttggctcagga
aacaatgtattctttattcctgaggtgtataaaatagagacaggaaacagtgagctgttt
gatgaatttgattcccaggagcagcatttctttgtattagggaacaatcctagtaatggt
tctgagactactactgatttgatccaaaagttatacatgctcttttcaactggagaactg
atgaacgataaagaagaggcacattcagaagaaatgccagctctagcagatggtaaacaa
gataaaaaagataaggaaatggaagctgcagacatctaa
DBGET
integrated database retrieval system
