Neomonachus schauinslandi (Hawaiian monk seal): 110582103
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Entry
110582103 CDS
T08474
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04151
PI3K-Akt signaling pathway
nsu04510
Focal adhesion
nsu04512
ECM-receptor interaction
nsu04820
Cytoskeleton in muscle cells
nsu04974
Protein digestion and absorption
nsu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110582103 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110582103 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110582103 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110582103 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110582103 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110582103 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nsu00535
]
110582103 (COL9A1)
Proteoglycans [BR:
nsu00535
]
Extracellular matrix (ECM) proteoglycans
Others
110582103 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
DUF4882
Motif
Other DBs
NCBI-GeneID:
110582103
NCBI-ProteinID:
XP_044773149
UniProt:
A0A8M1MQZ8
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Position
8:85592349..85675392
Genome browser
AA seq
925 aa
AA seq
DB search
MKNFWKIPVFFFVCSFLGSWASATVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT
GNTLEKTWTIWQIQDSSGKEQVGVKINGQTKSVAFSYKGMDGSLQTATFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIQSLPIKPRGQIGVDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPVRVTPSETTDQRGPPGQQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPVGDPGRRGPPGPPGPPGTQCLNTGTIGFHEGDPLCPNSCP
PGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGIMGI
VGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGD
TGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGVKGVAGEKGNTGAPGK
PGKLGNSGKQGPQGLPGEVGPRGPRGLPGSRGGIGPVGPPGLPGKLGSPGSPGLPGLPGP
PGLPGMKGDRGVVGEPGPKGGQGSSGEEGEAGERGELGEIGLPGPKGSVGNPGEPGLRGP
EGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGIQGLPGRAPTDQHIKQVCMRVMQEHLAE
MAASLKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGD
LGERGERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPG
PPGFCEPASCTLQAGQRAFSKGPDQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaattccagttttcttctttgtatgcagtttcctgggatcttgg
gcatctgctactgtcaagcgtcgcccaagattccctgttaattcaaattctaatggtgga
aatgaactctgtccaaaggtcaggattggtcaagatgatttaccaggctttgacttgatt
tctcagttccaggtagataaagcagcatctagaagagctattcagagggtagtaggatca
actgcattacaagtggcttacaaattgggaaataatgtagacttcaggattccaacaagg
catttatatcccaatggtctgcctgaagaatactcctttttaactacttttcggatgact
ggaaacacacttgaaaagacgtggaccatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgttgcattttcatacaagggaatg
gatggaagtctccaaactgcaaccttttcaaatttgccttccttgtttgattcccagtgg
cataagatcatgatcggtgtggaaaggagtagtgctactctttttgttgattgcaacagg
attcaatccttacctataaagccaagaggccaaattggtgttgatggctttgctgtgctg
ggaaaacttgcagataatcctcaagtttctgttccatttgaacttcagtggatgctgatc
cattgtgacccactacgccccaggagagaaacttgccatgagctgccagtccgggtaact
cccagcgagaccaccgaccagagaggtcccccgggccagcagggtccccccgggccccca
ggtccccctggagttccaggcatcgatggcatcgacggtgaccgaggtccaaagggtccc
ccgggtcccccgggtcccgctggagaaccgggcaagccaggagctccgggaaagccgggc
acgccgggcgccgacggattaacaggacctgatggatcccctggttctgttggaccaaga
ggacaaaaaggagaacctggtgttcctggatctcgcggatttccaggccgtggtattcct
gggccccctggtcctcctggggcagcaggactccctggagagcttggccgtgttggacca
gttggtgaccctgggagaagaggaccacctggcccccctggcccccccgggacccagtgt
ttgaatacgggaacaattggctttcatgaaggagatccattgtgtcccaattcctgtcca
ccaggtcgctcaggatatccaggcttaccaggcatgaggggtcataaaggggctaaagga
gaaattggtgaacctggaagacaaggtcacaagggtgaagaaggtgaccagggggaacaa
ggagaagttggagctcaaggacctccaggagctcaaggattacgaggcattatgggcata
gttggggccaaaggggaaaaaggtgctcggggcttagatggagaacctgggcctcaaggt
cttcctggtgcacctggtgatcaaggacagcgaggacctccaggagaaataggtcccaag
ggagatagaggccctcaaggttctagaggaattcctggcctccctgggaccaaaggtgac
acgggcttgccaggtgtggatggccgtgacggaatacctggaatgcccgggacaaagggt
gaaccagggaagcctgggcctcctggtgatgcaggattgcagggcttacctggtgtacct
gggattcctggtgtaaagggtgttgctggtgaaaagggtaacacaggtgctccggggaag
cctggtaaactggggaattcaggcaaacagggcccacaggggctgccaggagaggtggga
ccccgagggccgcgggggcttcctggcagtagaggaggaataggaccagtgggaccccca
ggactaccaggtaaactgggttctcctggcagccctggcctccctggcttgcctggcccc
cctggccttcctggaatgaaaggtgacaggggagtagtcggtgagccaggtccaaagggt
ggacagggttcgtctggtgaagaaggtgaagcaggagaaaggggtgaacttggagagata
ggattacctgggccaaagggatctgtgggtaaccctggggaacccggcttgagggggccc
gaaggaagtcgggggcttcctggcgttgaaggaccaagaggaccccctggaccacgaggc
gtgcagggagagcagggtgccaccggcctgcctggcatccagggccttccaggtagagca
ccgacagatcagcacattaagcaggtttgcatgagagtcatgcaagagcatcttgctgag
atggctgctagtctcaagcgaccggactcaggggcgtctggcctccctgggaggcctgga
ccccccggtcccccgggaccacctggagagaatgggttcccaggccagatgggacttcgt
ggcctcccaggcattaaaggcccccctggtgctcttggtttgagggggcctaaaggtgac
ttgggagaaaggggggaacgtggccctcctggaagaggtcctaagggcttgcctggagct
acaggtctcccaggtgaaccaggtcctgccagctacgggaggaatggccgggatggcgag
cgaggccccccaggggtggcaggaattcccggggtacctggtcccccgggccctcctggc
cctcctgggttttgcgagccagcctcctgcaccctgcaggctgggcaacgggcatttagc
aaagggcccgatcagtga
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