Neomonachus schauinslandi (Hawaiian monk seal): 110590964
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Entry
110590964 CDS
T08474
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X2
KO
K09444
interferon regulatory factor 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04625
C-type lectin receptor signaling pathway
nsu04668
TNF signaling pathway
nsu04917
Prolactin signaling pathway
nsu05133
Pertussis
nsu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
110590964 (IRF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
110590964 (IRF1)
09152 Endocrine system
04917 Prolactin signaling pathway
110590964 (IRF1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110590964 (IRF1)
09171 Infectious disease: bacterial
05133 Pertussis
110590964 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110590964 (IRF1)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110590964 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
110590964
NCBI-ProteinID:
XP_021557516
UniProt:
A0A2Y9I0L8
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Position
7:complement(24099166..24106442)
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AA seq
322 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDAKSKAKRKSCGDSSPDTFSDGLSSSTLPDDHSSYTTQGYLGQELEAERDL
TPALSPCTVTSTLPDWRIPVEIVPDSTSDLYNFQVSPMPSTSEATTDEDEEGKLTEDIMK
LLEQTGWQPTNVDGKGYLLNEPGAQPASLYGDFSCKEEPEVDSPGGYIGLISSDLKNMDT
SWLDSLLPPVRLPSIQAIPCAP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccctggctagagatgcagattaattccaaccaa
atcccagggttgatctggatcaataaagaggagatgatcttccagattccatggaagcat
gctgccaagcatggctgggacatcaacaaggatgcctgtctgttccgaagctgggccatt
cacacaggccgatacaaagcaggggaaaaggagccagatcccaagacatggaaggccaac
ttccgctgtgccatgaactccctgccagacattgaggaagtgaaggaccagagcaggaac
aaaggcagctcagctgtgcgggtgtaccggatgctcccgcccctcaccaagaaccagagg
aaagagaggaagtccaagtccagccgagatgctaagagcaaggccaagaggaagtcatgc
ggtgactccagtcccgataccttctccgatggactcagcagctccaccctgcctgatgac
cacagcagctacaccacccagggctacctagggcaggagttggaggctgagcgggaccta
actccagcactgtccccgtgtactgttactagtactctccctgactggcgcatcccagtg
gagattgtgcccgatagcaccagtgacctgtacaacttccaggtgtcacccatgccctcc
acttcggaagccacgacagatgaggatgaagaagggaagttaacggaggacatcatgaag
ctcttggagcagacggggtggcagccgacaaacgtggatgggaaggggtacctgctcaat
gaacccggggctcagcccgcctctctctacggagacttcagctgcaaggaggagccagaa
gttgacagccctggagggtatattggactgatatcttcagatctgaagaacatggacacc
agctggctggacagcctgttgcccccagtcaggctgccctccatccaggccattccttgt
gcgccatag
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