Nicotiana sylvestris (wood tobacco): 104223125
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Entry
104223125 CDS
T05026
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104223125
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104223125
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104223125
NCBI-ProteinID:
XP_009772793
UniProt:
A0A1U7W2F2
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Position
7:complement(164137344..164142140)
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AA seq
491 aa
AA seq
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MLQKSCIVIFLIFTSFFQFGLGMFMNLTLPGQHPDPEAVALEVNRKVNVSLSLLQSRRKM
LSYSSSDQSCQTGNPIDDCWRCDHNWQLNRQRLADCAIGFGQYALGGKGGRYYVVTSSSD
PDPVNPPPGTLRYGVIQEEPLWIVFAASMEIKLSQELIFNSYKTLDGRGVNVHITGGGCV
TLQYISNVIIHNIHIHHCYESGETNIRSSPTHFGWRTKSDGDGISIFGSRDIWIDHCSLS
NCKDGLIDVVMGSTGITISNNHFSHHNEVMLLGHSDDYLPDSGMQVTISFNHFGKKLIQR
MPRCRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQGNRYIAPFNPFAKEVTKRVETGEEK
WRNWNWRSEGDIMANGAYFVASGEGVEVKYEKAYSVEPKSADFLDQITMNAGVLIHRGSN
SGKWTAATNDTDGAVDGGGEDLVAISGDPDDYDGDEESGSSTIYTNSLLFTCLMALLAFL
FIHVKVTTMLL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctacagaaaagctgcattgtgattttcttgattttcacttcattttttcagtttggt
ttgggtatgtttatgaatcttactcttcctggtcagcatcctgatcctgaagctgttgct
cttgaagttaatagaaaagtgaatgtatcactctcactactccaatcaagaagaaaaatg
ttgtcctactcctcgagtgatcaatcttgccaaacaggcaaccctatcgatgattgttgg
agatgtgaccataattggcaactaaatcgccaaagactagccgattgtgccataggtttt
ggccaatacgccctaggtgggaaaggtggtcgttactatgttgtcacctcgtcctcggac
cccgacccggttaacccgccacctggcactctccgatacggcgtcattcaagaagaacca
ttatggatagtctttgcagccagcatggaaatcaaactctcacaagaactcattttcaac
tcgtataaaaccctagatggtcgtggagttaacgttcatattacaggtggagggtgcgta
acgttacaatatatctcaaatgttattattcataatattcatatacatcattgttatgaa
tctggtgaaactaatataagatctagtcctacacattttggttggagaacaaaatcagat
ggagatggaatttctatatttggatcaagagatatttggattgaccattgttcattatca
aattgtaaagatggtttaattgatgtagtaatggggtccactggtattacaatatcaaat
aatcatttttcacatcataatgaggtaatgttattaggtcatagtgatgattatttgcca
gattcaggaatgcaagtgacaatttcttttaatcattttgggaagaaattaattcagaga
atgccaaggtgtagaagaggttatattcatgttgtgaataatgatttcacaagatgggaa
atgtatgcaattggaggaagtggtaatcctactatcaacagtcaaggaaatcgttatatt
gcacctttcaacccttttgctaaagaggtaacaaaaagagtggagacaggagaagaaaaa
tggaggaattggaattggagaagtgaaggggatataatggcaaatggagcatactttgtg
gcctcaggtgaaggagttgaagttaaatatgaaaaagcttatagtgtggagcccaaatct
gctgattttcttgaccaaattacaatgaatgctggtgttcttattcacaggggaagcaac
agtggtaaatggactgctgcaaccaatgacaccgatggcgcggtggacggtggcggagaa
gatttggtggcgatttccggcgacccagacgactatgatggtgatgaagagtctgggagc
tctacaatttacactaactctttgctatttacttgtcttatggcattgttagccttcttg
ttcattcatgtcaaagtaacaaccatgcttttgtag
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