Nicotiana sylvestris (wood tobacco): 104230344
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Entry
104230344 CDS
T05026
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104230344
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104230344
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104230344
NCBI-ProteinID:
XP_009781427
UniProt:
A0A1U7WNA6
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Position
2:complement(19271406..19273270)
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AA seq
383 aa
AA seq
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MSSLAFVLTLLFLGISTLHAEYYAPLPYSYSYAPTTKKTTNVIDSCWRTKSNWAKNRRAL
ADCAVGYGKAAIGGKLGAIYVVTNPSDDPVNPKPGTLRYGVIQSKPLWITFAKNMVITLK
NELMINSYKTIDGRGAKVEIAYGPCITIAHVSHVIIHGISIHDCKPGKKGIVRDSPVHAG
HRGGADGDGIDIFHSSHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFTQHDKVMLFGH
NDNNKEDKIMKVTVAFNYFGPGLIERMPRVRLGYAHVANNRYEKWLMYAIGGSANPTIFS
EGNYFMAYKSTQVTKREAKNGWKNWKWRSSKDKFMNGAYFIPSGYGSTNPYYSKAQSFPV
ADGSMVPSLTADAGPLRCTSYKC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttagcatttgtacttactcttctttttttgggtatatcaactttacatgcc
gagtattatgcacctcttccttatagttatagttatgcacctactactaaaaaaactacg
aatgtgattgattcttgttggcgtaccaaatcaaattgggccaagaaccgccgtgcattg
gctgattgtgccgtcggctacggcaaagctgccatcggagggaaattgggtgccatatat
gtcgttactaatccgtcggacgaccccgtaaaccctaaaccaggtacactaagatatggt
gtaattcaatccaaaccactatggattactttcgccaaaaacatggttataacactaaag
aatgagcttatgatcaatagttacaagactatagatggaagaggagctaaagtggagatt
gcatatggaccttgtatcacaattgcacatgttagccatgtgattatacatgggattagc
atccatgattgtaagcctggtaaaaaaggcattgtgcgggatagtccggtgcatgccggc
catcgtggcggcgctgacggagacggtattgatatttttcattcttctcatatttggatc
gaccattgctatcttgcacgttgcaccgatggccttattgacgttattcatgcttctact
gctgttaccatctccaacaactacttcactcagcatgataaagttatgttatttgggcac
aatgataacaataaagaagacaagattatgaaagtgacggtagccttcaactactttggc
cctggtttaatagaacgaatgccaagagtgaggctaggttatgctcatgtggccaacaat
cggtacgaaaaatggttgatgtatgctattggtggaagtgcaaatccaaccatcttcagt
gaaggaaattatttcatggcatataaatccacacaagttacgaagagggaagcaaagaat
gggtggaagaattggaagtggaggtcttcaaaggataaatttatgaatggagcatatttt
ataccatctggatatggaagtactaatccatattactcaaaggctcagtcatttcctgtg
gctgatggatctatggttccttctttaactgctgatgctggacctttacgttgcacatcc
tataaatgttaa
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