Nicotiana sylvestris (wood tobacco): 104235904
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Entry
104235904 CDS
T05026
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104235904
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104235904
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104235904
Protein phosphatases and associated proteins [BR:
nsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104235904
Spliceosome [BR:
nsy03041
]
Common components
Common spliceosomal components
SR proteins
104235904
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_DEAH11
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
104235904
NCBI-ProteinID:
XP_009788034
UniProt:
A0A1U7XM63
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All DBs
Position
2:complement(73825999..73829476)
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AA seq
231 aa
AA seq
DB search
MADSTRKRYSRSPSPWEEKSRSRSRSRSRSRSRSWSRPRGRSRSKSQGRAEVSNPGNTLY
VTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDANRCIKNLNQ
SVLEGRYITVEKSRRKRPRTPTPGHYLGLESTRGDSKLLMLFFIALAEGYCGDRGRYRGR
DDYGYRRPPRRSPYRGVRGYSPRRSPYAGRSRRLRSRSYSPYERNYHRGSR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctactcgcaaaaggtattcccgctctccttctccttgggaagaaaagtca
agatctcgctctcgatcaaggtctagatcccgatccagatcatggtcaaggccaagagga
agatccaggtccaaaagtcaaggaagggctgaagtttctaatcctggaaacacactctat
gtgactggattatctacaagggtcactgaaagggaccttgaggagcatttctcaaaggaa
ggaaaggtgaagtcagtttttctggttgtggagccccgttctcgtatctctcgtggtttt
gcttttataacaatggacagtcttgaggatgctaatcgctgcattaagaaccttaaccag
tctgtccttgaaggccggtacataacagtggagaagtctcgtagaaaacgcccaaggact
ccaacacctggtcattatcttggacttgagagcacacggggtgatagtaagcttctgatg
ctttttttcattgctttggccgaaggatattgtggtgatcgtggtaggtatcgtggccgt
gatgactatgggtatcgaagacctccaaggcgctcgccatatagaggtgtacgaggttat
tctcctaggcgctctccctatgctggaaggtcaagacgtctgcgatcccggtcatattct
ccttatgagaggaactatcatcgtggttctagatag
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