Nicotiana sylvestris (wood tobacco): 104237464
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Entry
104237464 CDS
T05026
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104237464
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104237464
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104237464
NCBI-ProteinID:
XP_009789922
UniProt:
A0A1U7XCX5
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Position
2:complement(128537503..128539309)
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AA seq
396 aa
AA seq
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MGISKTKINGLIVLLFFTFVAVGIAVPDNSTRRHLSKKYKGPCVAANLIDKCWRCNPRWA
DDRQKYADCAMGFGRNAIGGKGGRIYVVTDPSDYNVENPVPGTLRHAVIQKEPLWIIFSK
HMKIKLNRELLMQSYKTIDARGHNVHIEKGAGIKMQGVNNIIITNLHIHNIGPSSGGMIR
DSIDHIGIRGADEGDAISIFASHDIWIDHVSMSRAADGLIDAVQGSTGITISNCHFTDHD
KVMLFGANDNYLDDKKMQITLAYNHFGKRLDQRMPRCRLGFFHLVNNDYTHWMRYAIGGS
SEATIISQGNRFIAQHNVDIKEVTHREKAQESEWRHWTWLSQDDDMQNGAFFRTSGDPNA
LSKFKNLNLMPAEPSYRVGILTKFSGSLGCTVGRPC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctcaaaaacaaaaatcaatgggcttattgtcctcttattcttcacatttgtc
gcagtaggaatagcagtgccagacaacagcacaagaaggcacttgtccaaaaaatacaaa
ggaccatgtgttgctgcaaatcttattgacaaatgctggagatgtaaccctcgttgggct
gatgatcgccaaaaatatgctgattgtgctatgggttttggccgtaatgctattggagga
aaaggtggaaggatttatgtagtcacagatccttctgactacaacgtcgaaaatcccgtg
ccaggtaccctaaggcacgcagtgatccagaaggaacctttgtggatcatattctcaaaa
catatgaaaattaagttgaacagggaactgcttatgcaaagctacaaaaccattgatgca
cgtggacacaatgtccatattgaaaaaggagctggaattaagatgcaaggtgtaaataac
attatcatcactaatcttcacattcacaacatcggtccttcttctggtggcatgatcagg
gactcaatagaccacataggtatcaggggtgcagatgaaggagatgctattagcatcttc
gcttctcatgatatttggatcgaccacgtgtcgatgtcacgtgccgcggatgggctcatt
gacgccgtccaaggatctactggtattactatctccaattgccactttactgaccacgat
aaagtaatgttgtttggtgcaaatgataattacctcgacgataagaaaatgcaaatcaca
ttagcgtacaaccactttggtaagaggttggatcaaaggatgccaaggtgcaggcttgga
ttcttccatcttgtcaacaacgattacactcattggatgaggtacgccattggcggcagc
agtgaggctaccatcattagccagggtaatcgttttattgctcaacacaatgttgatatt
aaagaggtgacacacagggaaaaggcacaagaatcagaatggagacactggacttggtta
tcacaagatgatgatatgcaaaatggtgctttctttagaacttctggagatccaaatgca
ctcagcaaatttaagaaccttaatttgatgccagcagaaccatcttacagagttggaatt
cttactaagttttcaggatcactcggttgcacagtaggacgcccatgctag
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