Nicotiana tabacum (common tobacco): 107764788
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Entry
107764788 CDS
T04643
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107764788
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107764788
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107764788
NCBI-ProteinID:
XP_016438872
UniProt:
A0A1S3XGN5
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Position
Un
AA seq
407 aa
AA seq
DB search
MATLSLSFLFLLSSLLLLPSLFASSSPLSNPQAVVDEVHRSVNASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVI
QTEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHVH
DCKQGGNAMVRSSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIMGSTAI
TISNNFMTHHDKVMLLGHSDSYVQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTEGDLMLNG
AYFTQSGAGAKSSSYAKASSLSARPSSLVSNLVSGSGALNCRKGSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctctctttctttcctcttcctcttgtcttcccttctccttctcccgtcc
ctctttgcctcctcctctcccctatctaatcctcaagctgttgtagatgaagtacatagg
agcgtaaatgcttcgagaaggaacttaggctatctttcttgtggtaccggaaatcctatt
gatgattgctggcgttgtgatccgaactgggagaagaaccgccaacggttagctgattgc
gccattggctttggcaaaaacgccattggcggtagggatggtaaaatttacgtggtcacc
gactcaggtgacgacgatcctgtcaacccaaagccagggactctccgtcatgccgttatc
caaactgaaccgttgtggataatttttgctagggatatggtaatccaattaaaagaagaa
cttattatgaactcattcaaaacaattgatggtagaggtgcgagtgtacacattgcgggc
ggtccatgtataacaatacagtacgtaacgaatattattatacatggaatacacgtacat
gattgtaagcaaggagggaatgctatggtgcggagctccccatcgcactacgggtggaga
actatttcagatggtgatggagtgtcgatatttggtgggagccatgtttgggtggaccat
tgctctttgtccaactgcaaagacggcttgattgacgccattatggggtccacagctatt
acaatttctaataatttcatgactcaccatgataaagttatgctcttgggacatagtgat
tcatatgttcaagacaagaatatgcaagttaccattgctttcaatcactttggggaaggc
cttgtccaacgaatgccaagatgtagacatggttatttccatgtggtgaacaatgactac
acccattgggaaatgtatgcaattggtggaagtgctagtcccaccatcaatagccaaggg
aacagatttcttgcccctgatattaggtttagcaaagaggtaacaaaacatgaggatgct
ccagagagtgaatggaagaattggaattggaggacagagggggatttaatgttaaacggt
gcatatttcacacaatcaggagctggagccaaatcatcaagttatgctaaggcttcaagt
ttaagtgcaaggccttcttctttggtcagcaatttagtatctggttctggcgctctcaat
tgccgaaagggttctcgttgctga
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