KEGG   Nicotiana tabacum (common tobacco): 107766914
Entry
107766914         CDS       T04643                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4-like
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03022  Basal transcription factors
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107766914
  09124 Replication and repair
   03420 Nucleotide excision repair
    107766914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107766914
   03400 DNA repair and recombination proteins [BR:nta03400]
    107766914
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107766914
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107766914
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 107766914
NCBI-ProteinID: XP_016441296
UniProt: A0A1S3XMX5
LinkDB
Position
Un
AA seq 243 aa
MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV
VVIATGYNSCDYVFDSSSSSMQRAECLLEKLEEFVDKDESLSQEDSVDGVGFSLLSGSLS
MALCYIQRVFRTGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDSCVIGSQH
SAFLQQASYITGGVYLKPQVSDGLFQYVSVSVVEFVKTKLSLAYQFNSSVAYIQHQTFRG
RLV
NT seq 732 nt   +upstreamnt  +downstreamnt
atgactccggtttcatcaaagctttacacagatgatgtaagcctattgatggttctgatc
gatacaaatccgtatttttggagctccatgaagaatactgccttcacattctctaaattc
ctatctcatgttcttgctttcttgaattcaatacttctgctgaatcagatgaaccaagtg
gttgtgattgcaactggttacaattcatgtgactatgtgtttgattcgtctagttcctca
atgcaaagggctgaatgcttgttggagaaactggaggagtttgtggataaagatgaatcc
ttgagtcaagaagactctgttgatggagttggattttcacttctttctggttccctttcc
atggctctctgctatattcaacgggtatttcgtacagggcctcttcatccacagcctcgg
atattgtgtctgcatggatcgccagatgggcccggacaatatgtcgcagtcatgaatgca
attttctcagctcaacgttcaatggtaccgattgattcatgtgtaataggatcccagcat
tctgcctttcttcagcaggcctcttacatcactggtggtgtatatttgaaaccccaagta
tcagatggactgtttcaatatgtctcggtaagtgttgttgaatttgtaaagactaagtta
tctctagcttaccagtttaactcctcagtagcttatatccagcatcaaacatttaggggt
cgtttggtttga

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