Nicotiana tabacum (common tobacco): 107788639 Help Entry 107788639         CDS       T04643                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107788639  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nta03019]     107788639 Enzymes [BR:nta01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      107788639 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      107788639 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 FtsK_SpoIIIE AAA_24 ABC_tran DUF1611 ATP_bind_1 MMR_HSR1 AAA_29 Motif Other DBs NCBI-GeneID:  107788639 NCBI-ProteinID:  XP_016465820 UniProt:  A0A1S3ZMQ4 LinkDB All DBs Position Un AA seq 439 aa AA seqDB search MAYGGTNVNPLAATGVSTSVRQVKLDKECELRIETSLDSPLRLRLLTGTAEIFGTEIPPE IWLTIPPRLKFAVFTWYGATIEMDGPTETDYTADETPMISYINVHAVLDGRRNRAKASPS DSDTSQGPRVVVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCVAATP IELPIDPVEGIPLEMPMVYFFGHVTPSANIDHYKVLVKELAQTLERQFSGNAESRASGMV INTMGWIEGVGYELLLHAIDTFNATVILVLGQEKLCSMLKDVLKNRPNVDVVKLQKSGGV VSRNAKVRQKARGYRIREYFYGPSNDLSPHSNVVNFGDLFIYRIGGGPQAPRSALPIGAE PAADPTRLVPVSINRDLLHLVLAVSYADEPDQIISSNVAGFIYVTDVDMHRKKITYLAPC AGELPSKYLIVGTLTWIEN NT seq 1320 nt NT seq  +upstreamnt  +downstreamnt atggcttatggaggcacaaatgtcaatccattggcagcaacaggtgtttcaacatctgtg agacaggtgaagctggataaagaatgtgagctccgaattgaaaccagccttgactcgccc ctccgtctccgactcctcactggaacagctgagatttttgggactgaaatccctcctgag atctggcttaccatccctccaagactcaaatttgctgtttttacttggtatggagcgaca atcgagatggatggtcccactgaaactgattatacagcagatgagacgccgatgataagt tatataaatgttcatgctgtacttgatggacgaagaaatcgtgccaaagcttcacctagt gattctgacacttctcagggcccgagggtagtcgttgtgggacctacagattctggcaag agtactttatcaaggatgcttcttagttgggcagcaaaacagggatggaaacctactttt gtggatttggacattggtcaaggatcgataactattccaggatgtgttgctgctacgcca attgagttgcctattgatccagttgaaggaattccacttgaaatgcctatggtctacttc tttggtcatgtgactcctagtgccaacatagatcactacaaggtactcgtcaaggagcta gctcagactctggagaggcaattttctggcaatgctgaatctcgagcttcaggcatggta ataaatacaatgggatggatagagggagttggttatgagttgctactccatgcgattgat acattcaatgccacagttattcttgtcttgggtcaggaaaaactttgtagcatgctaaaa gatgtattgaagaatcggcctaatgtggatgtggtgaaacttcaaaagtctggtggtgtt gtatcaaggaatgcaaaagtacgccagaaagcaaggggctacagaataagggagtacttt tatggcccttcaaatgacctctcaccacattctaatgtagtaaacttcggtgacttgttc atctaccgaattgggggtggaccacaggctccacgctcagctttacctattggtgcagag cctgctgcagatcctacaagattggttcctgttagtatcaaccgggacttgcttcatttg gttcttgccgtctcgtatgccgatgaaccagatcaaataatttccagtaatgttgccgga ttcatctatgtcacagacgttgacatgcataggaaaaagataacatatcttgcaccatgt gctggggaacttccgagcaaatacctaatcgtgggaaccttaacatggattgaaaactga

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