Nicotiana tabacum (common tobacco): 107798776
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Entry
107798776 CDS
T04643
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107798776
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107798776
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107798776
NCBI-ProteinID:
XP_016477301
UniProt:
A0A1S4AKX6
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Position
Un
AA seq
405 aa
AA seq
DB search
MSSLLFIFVLFVTLLLTPLLVSSIQDPELVVQEVHRSINASLTRRNLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGNDDPVNPKPGTLRHAVIQD
EPLWIIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHYSTNIIIHGINIHDC
KQSGNGNIRDSPHHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSAAPTINSQGNRFLAPNQKFRKEVTKHEDAPESEWKSWNWRSEGDLMLNGAY
FRQTGAGASSSTYARASSLSARPSTLVGSMTTNAGPLGCKKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcttctcttcatatttgttctttttgtcacactactgctaaccccacttctt
gtttcttcaatccaagatccagagcttgtggtacaagaagttcataggagcatcaatgct
tcattgacgaggaggaacttgggctatttgtcgtgtggaacaggaaatccgattgatgat
tgttggcgttgtgaccccaattgggaaaaaaatcgccaacgtttagctgattgcgccatt
ggcttcggaaaggatgctattggaggaagaaatggaagaatttacgtggtcactgactca
gggaacgatgatcccgtaaaccctaaacccggaaccctaagacatgctgttatacaagat
gagcctttgtggatcattttcaaaagagacatggtcattcagctcaagcaagaactcgtc
atgaactctttcaagaccatagatggccggggcactagcgttcacatttcaggtggtcct
tgcattacaatccattacagcacgaacattatcatacacgggattaatatacacgactgc
aagcagagtggtaacggcaatattagggactcaccgcaccattcaggatggtgggatgtt
tccgacggagacggcatttcaattttcggagggaagaatatatgggtggatcattgttcc
ttgtcaaattgccacgacggtctaattgatgcaattcatggatccacagcaattacaatt
tctaacaactattttactcatcatgataaggtcatgttattgggacatagtgattctttt
acgcaggataaaggcatgcaagttacagttgcctttaatcattttggtgaaggtttggtg
cagagaatgccgaggtgtagacatggttattttcatgtggtgaataatgactatacccac
tgggaaatgtatgccattggtggtagtgctgctcctactattaatagtcaaggcaatagg
tttcttgctcccaatcagaaattccgtaaagaggtgacaaagcatgaggatgcaccagaa
agtgagtggaaaagctggaactggaggtcagaaggtgacttgatgttaaatggtgcctat
tttaggcaaactggtgcaggtgcatcatcttctacttatgctagggcatcaagcttaagt
gcaaggccatctaccttggttggatccatgaccacaaacgccggtcctctcggctgcaaa
aaaggctctcgctgctag
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