KEGG   Nicotiana tabacum (common tobacco): 107807958
Entry
107807958         CDS       T04643                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107807958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107807958
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107807958
 Complex B
    107807958
 Complex C
   U2 SnRNP specific factors
    107807958
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 107807958
NCBI-ProteinID: XP_016487916
UniProt: A0A1S4BGC9
LinkDB
Position
Un
AA seq 808 aa
MLSTTPILPLPAPPLDGNLGPTPPAQVVEEPKDDNMEENEEDNNKANNVPTSVATHTRTI
GIIYPPPDIRSIVDKTAQFVAKNGPEFEKRIVLNNAGNAKFNFLSASDPYHAYYQHRLAE
ARAQNQASGEQPTQPADQEAAPAPPTADGAEATARPDPSAQFRPVRRVLEPPEAEQYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLTDKLRKSAADMTTVLERCLHRLEWEKSQEQARQKAEDEIEQERLQMAMI
DWHDFVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEV
QLVEEGMRAATLQENGDVKSAETMGIAEEQDPPMRIVKNWKRPEERIPAERDPTKYVVSP
ITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDI
FGTTEEEVSNAVKAEIEKKKEEPKQVIWDGHTGSIGRTASQAMSHNTNADDQNDAANDER
NLPGPQAPPPPRPGFPSVRPLPPPPGLALNIPRPPNTVQYSTSTGAGVAAPPPPRPPMVN
MIPQVRPPPPPMPQMLGQQNLMVNRPPMPPSMAMNSHGHPIPPPPGSQFTPLGAPRPFVP
LPMSQPGMSMIPPPPIPQGMPPPPPLEEAPPLPEEPEPKRQKLDESVLIPEEQFLAQHSG
PARINVSVPNTDEGNLKGQVLEITVQSLSESIASLKEKISGEVQLPANKQKLSGKAGFLK
DNLSLAYYNVASGETLSLSLRERGGRKR
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgttgagcaccacgccaatattaccccttccagcgcccccgttggatgggaatctggga
ccaacacctccagcgcaggtggtagaggaaccaaaggatgataacatggaggaaaatgaa
gaggacaacaataaagccaataatgttccaacgtctgttgcaacacatacgagaaccatt
ggtatcatttatccgcctccagatattaggagtattgtcgacaagactgcacagtttgtg
gcgaagaatggtccagaatttgagaagaggattgttctaaataacgctggcaatgcaaaa
tttaacttcctgagtgcttctgatccttaccatgcctattatcagcaccgtttggctgaa
gctcgtgcacagaatcaggcttctggagagcagcctactcaaccagcagaccaagaagca
gcccctgctcctcctaccgctgatggtgctgaggcaactgctaggcctgatccgtctgct
cagtttagacctgtcagaagggttcttgagccacctgaggcagagcaatatactgttaga
ctccctgaagggatcacaggtgaagaattggatatcattaagcttacagcacaatttgtg
gccagaaatgggaagtctttcttaacagggttgacgagcagggagattaataatccgcag
tttcattttctaaagcctactcacagcatgttcatgtttttcacttcacttgcggatgcg
tattcgaaagttctgatgcctcctaaaggcttgacggataagctgcggaagagtgctgct
gacatgacaacagtcctggagcgatgtctgcatcgattggagtgggaaaagtcacaggag
caggctaggcagaaagctgaagatgagatagaacaggagagattgcagatggctatgatt
gattggcatgattttgttgtcgttgagactatagattttgctgatgatgaggatcaggat
ttacctccacctatgacccttgaggaggttataaggaggagcaagatgcctacattggag
gaagaagagtatgttgagcctggaaaagaggtggaaatggagatggatgaagaagaggtg
cagctagtcgaagaaggtatgagagctgcgactcttcaagagaatggtgatgtcaagagt
gctgaaaccatgggaattgcagaggaacaggacccacctatgcggattgtgaagaactgg
aagaggcctgaagagaggatccccgcagaaagggacccgactaagtatgttgtctctcct
ataactggtgagctaatacctattaatgaaatgtctgaacatatgaggatctctctcatt
gatccaaagtacaaggaacagaaagacaggatgtttgcgaagattaaggagacaactctt
gcgcaggatgatgagatatctaggaacattgttgggcttgcaagaacccgtccggatata
tttggtactacggaagaagaagtttcaaatgcggtcaaggctgagattgagaaaaaaaag
gaagagccgaagcaggtcatatgggatggtcacacaggtagcattggtcgcactgcaagc
caggcaatgtctcacaacactaatgcagatgatcagaatgatgctgcaaatgatgaaaga
aaccttcctggtccgcaggctcctccacctcccagacctggttttccatctgttaggcca
ctacctccacctcctgggcttgcgctgaatattcctaggcctcctaataccgtccagtat
tccacctccaccggtgctggggttgctgctccgcctccacctcgacctcctatggttaac
atgattcctcaggttcggcccccacctcctcccatgccacagatgctaggtcagcaaaat
ctcatggtaaatcgtccaccaatgcctccatcaatggccatgaattcgcatggccatcct
attccaccacctcctggatcacagtttacacctttgggagcacctcgcccctttgttccc
ctcccgatgtcccagcccggaatgtctatgattccgcctcctcctattccccaaggaatg
cctcctcctcctccactggaagaagcccctcctctacctgaagagccagagccgaagagg
caaaagcttgatgagtctgttctcattcctgaagagcagtttttggctcagcactcgggt
cctgcaaggatcaatgtatctgtgccgaatactgacgaagggaatctcaaaggacaagtt
ctggaaatcacagtgcaatctctgtctgaaagcattgccagtctaaaagagaagatttcc
ggggaggtccagcttcctgcaaacaaacaaaagctgagtggaaaggctggttttctcaag
gacaacttgtctcttgcatactataatgttgcatctggagaaactctcagtctctctctg
agagaacgtggtggcagaaagagatga

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