Nicotiana tabacum (common tobacco): 107811053
Help
Entry
107811053 CDS
T04643
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107811053
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107811053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107811053
NCBI-ProteinID:
XP_016491388
UniProt:
A0A1S4BRF9
LinkDB
All DBs
Position
Un
AA seq
437 aa
AA seq
DB search
MATALYFLCPLLIMMMLFITATANKSIEEAKQFQSLSSSTLANRLSENDELRHEHAEDDP
EAIASMVAMSIRNSTERRKLGYFSCTTGNPIDDCWRCDRHWVRNRKRLADCSIGFGRNAI
GGRDGRYYVVTDSGDDDPVNPRPGTLRHAVIQDAPLWIVFKHDMVITLKQELMMNSFKTI
DARGVNVQIAYGACITIQFVTNIIIHGLHIHDCKPTGNAMVRNSPSHYGWRTMADGDGIS
IFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVILLGHSDSYIRDKVMQ
VTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPVNP
FAKEVTKRVEPWEGSWKHWNWRSEGDLMLNGAYFTASGRAAPRSYARASSLAAKSSSMVG
TITSNAGALSCHIGYQC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgctctgtattttctttgtccattgctaattatgatgatgcttttcatcact
gccacagccaataaaagtattgaagaagcaaagcaatttcagagcttaagtagctcgact
ctggcgaacaggttaagtgaaaatgatgaactcaggcatgaacatgctgaagatgatcca
gaagctatcgcttctatggtggctatgagcattaggaatagcacagagaggaggaaattg
ggttacttctcatgtacaacgggaaatcctattgatgactgctggcgttgtgatcgccat
tgggtgcgtaaccgcaaacgcttagctgactgttctattggctttggtcgaaatgccatt
ggtggtcgtgatggaaggtattatgttgtgactgactcaggtgatgacgatccagtaaat
ccccgacctggaacacttcgtcatgcagtaattcaagacgcaccattatggatagtgttt
aaacatgatatggtcatcacacttaagcaagaacttatgatgaacagtttcaagacaatt
gatgctcgtggtgtgaatgtacaaattgcatatggggcttgtattactatccaatttgtt
actaatattattattcatggtcttcatattcatgactgtaaacccactggtaatgccatg
gtccgaaactcaccatcacactatggttggaggacaatggctgatggtgatggcatttcc
attttcggttcgagccatatttggattgaccacaactctctttctaattgtgctgatggt
ctcattgatgctatcatgggttcaactgcaattaccatttcaaacaattactttacacat
cacaatgaggtgattttattggggcacagcgactcctatattagagataaggttatgcaa
gtgacgattgccttcaaccattttggtgagggtctgatccagagaatgccaagatgtagg
catggttatttccatgtggtgaacaatgactatacacactgggaaatgtatgccattggt
ggtagtgctgatcctacaattaacagccagggcaacagataccttgccccagtgaaccct
tttgccaaagaggtgacgaaaagagtggaaccatgggaaggatcatggaagcactggaac
tggagatcagaaggagaccttatgctgaatggagcatactttactgcgtctggacgtgcc
gctccacgcagttatgcaagagcctcaagcttagctgctaagtcctcttctatggtggga
actattacctcaaatgctggtgcactttcttgtcacataggctaccaatgttga
DBGET
integrated database retrieval system
