Nicotiana tabacum (common tobacco): 107817310
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Entry
107817310 CDS
T04643
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107817310
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107817310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
AAA_14
NACHT
nSTAND3
NPHP3_N
Viral_helicase1
Cytidylate_kin
ATPase_2
AAA_2
AAA_28
RNA_helicase
TsaE
AAA_5
AAA_30
TIP49
RuvB_N
ABC_tran
DUF815
AAA_11
AAA_33
SLFN-g3_helicase
AAA_17
AAA_24
KAP_NTPase
Rad17
AAA_7
IstB_IS21
bpMoxR
PduV-EutP
NB-ARC
ResIII
nSTAND1
AAA_19
AAA_3
nSTAND6
Mg_chelatase
Cytidylate_kin2
SRPRB
CPT
KTI12
NTPase_1
Motif
Other DBs
NCBI-GeneID:
107817310
NCBI-ProteinID:
XP_016498597
UniProt:
A0A1S4CBJ3
LinkDB
All DBs
Position
Un
AA seq
455 aa
AA seq
DB search
MSAPMEISMVNAPEVNTSEQNGIVPDPPPPPSLTLPEEKVLVSVEVCLKTSSTARIDDVT
LAVERMLEKRSMSYEDGPIPIPIDDLFLAENVQHICVCDTDVWVENRDILLFWQVKPVVH
VFQLSEEGPCEELSGDGQLSTFNEWILPAKEFNGMWESLIYESGLKQRLLRYAASALLFT
EKGVNPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQSQLVEVNAHSLFSK
WFSESGKLVAKLFSKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNAL
LTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLR
TGVLSNSQDAYHLLPNFAGLRENLSIVTTKSQMSLHLGKQLLEAAEACEGMSGRSLRKLP
FLAHAALASPYNCEPGKFLHVMMETAKRERSELSE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctccaatggaaatctccatggtcaacgctcctgaagtcaacaccagtgagcaa
aacggcatcgttccggaccctcctccacctccgtcactcacattgcctgaagaaaaagtt
cttgtttcagttgaagtttgtttgaagacttcaagtacagctcgcattgatgatgttaca
ttagctgttgagagaatgctggaaaagaggagcatgagctacgaggatggtccaattcca
attccaattgatgatctctttcttgctgaaaatgttcagcacatatgtgtttgtgacaca
gatgtctgggtggagaaccgagatattcttctgttctggcaagtaaaaccagttgttcat
gtattccagcttagtgaggaaggaccatgtgaagagttgagtggggatggccagctttct
acatttaatgagtggattcttcccgcaaaggaatttaatggaatgtgggaaagcttaata
tacgaatctggtctcaagcagagattgttgcgatatgcagcaagtgctttgctgtttacc
gaaaagggagttaatccattcctagtatcctggaatcgtattattcttctgcatggacct
ccaggaactggaaagacatctttatgcaaagcattggcgcagaagctttccatacgcttt
agctctagatacccacagagccaattggtcgaagtgaacgcacattcattgttcagtaaa
tggttttctgaaagtggcaagctggttgcaaagctgttctcgaaaatccaagaaatggta
gaggaagaaaacaatctggtatttgtcctgattgatgaagttgaaagccttgctgctgct
agaaaagctgctttgtctggatctgaaccttcagattctatccgggtagtgaatgctctg
ttgacccaacttgacaagttgaagtctgcaccaaatgtcataattctcactacatccaac
atcactgctgctattgatatagcttttgtggatcgtgctgacattaaggcatatgtggga
ccaccaactcttcaagcacgttatgagatactgagatcatgcttgcaagagctattgcgt
actggcgtcttgtcaaattcccaggacgcttaccatcttcttccaaattttgctggtttg
agggagaacctgagcatagttacaaccaagtctcagatgtcattacaccttggtaaacaa
ctccttgaagctgcagaggcatgcgagggaatgagtggaagatcacttagaaagctacca
ttcttggcgcacgcagcacttgctagtccatacaattgtgagcctggcaaatttttgcat
gtaatgatggaaacagctaaaagagaacggtcagagctgtctgagtga
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integrated database retrieval system
