Nicotiana tabacum (common tobacco): 107822826
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Entry
107822826 CDS
T04643
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107822826
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107822826
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
DUF6147
Motif
Other DBs
NCBI-GeneID:
107822826
NCBI-ProteinID:
XP_016504883
UniProt:
A0A1S4CUV0
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Position
Un
AA seq
399 aa
AA seq
DB search
MMRKMSVFFLSPFVIIIILFFFNLSIAADSMYNVLNYGAKSDGKSDSSKAFLSAWTAACT
STSPATIFVPKGSYLLGNAYFYGQTCKSNAITIRIDGTLIAPSDYNVIGKSGSWIKFERV
TGVSIIGGTLNGQGARLWACKNSGKGCPKGATTLAFYNSNNIGISGLTSQDSQMFHILFD
GCHKAKLQGLKISAPGNSPNTDGIHLQSSTDVTILNSHIGTGDDCISIGPGNSNLWIENI
ACGPGHGISIGSLGWDMQEPGVQNVTVKTATFTRTQNGVRVKTWARPSNGFVRDVLFQHA
VMNSVENPIIIDQNYCPDRGNCPDQGSGIKVSDIKYHDIHGTSATEVAVKFDCSKTNPCN
EITLQDVNLNFKDHPAEALCVNAGGKASGLQQPNSCLRT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaaatgagcgtcttttttctttccccatttgtcataattatcatcctcttc
ttcttcaacttgtcaatagcagcagattccatgtataatgtcctaaactacggagcaaag
tctgatggaaaatccgattcgtcgaaggcttttcttagtgcatggactgcagcatgtact
tctactagccctgccaccattttcgtgccaaagggaagttacttgcttggtaatgcatat
ttctatggtcaaacatgcaagagtaatgccattactatacgtattgatggcacacttata
gctccctctgactataatgttattgggaaatctggaagctggattaaattcgaacgagtc
actggagtttcgatcattggtggaaccctaaatggacaaggtgcccgtctttgggcatgc
aaaaactccggcaaaggttgtcctaaaggagctacgactttagctttctacaactcaaac
aacattggaataagtggattaacttcacaagacagccaaatgttccacattttgttcgat
gggtgccataaggcgaagttacaaggattgaagatttcagctcccggaaatagtcccaac
actgatggaattcatttacagtcatcgactgatgttaccatcttgaattctcatattgga
actggcgatgattgtatctcaattggtcctggcaactccaacttgtggatcgaaaacatt
gcctgcggccccggccacggaataagcattgggagcttaggttgggatatgcaagagcca
ggagttcaaaacgtgacagttaaaacggcaacatttactagaacccagaacggagtgagg
gtcaaaacatgggctaggcctagcaatggcttcgtgagggatgttctttttcaacacgcg
gtgatgaatagtgtcgaaaatcccatcatcatagatcaaaattactgcccagatcgtgga
aattgtcctgatcagggctctggtattaaggtcagcgatataaagtaccacgacatacat
gggacatcggccacagaagttgcagtaaaattcgattgcagcaaaacaaatccatgtaat
gagataacgctacaagacgtgaatcttaattttaaagatcatccagctgaagctttatgt
gttaatgctggaggaaaggcttcgggtctacaacaaccaaatagctgcttacgaacttga
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