Nicotiana tabacum (common tobacco): 107823132
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Entry
107823132 CDS
T04643
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107823132
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107823132
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Ortholog
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
107823132
NCBI-ProteinID:
XP_016505210
UniProt:
A0A1S4CVQ6
LinkDB
All DBs
Position
Un
AA seq
438 aa
AA seq
DB search
MAVSWRSCLSLLVVTMLVINVSASNSPEEAKQFQSLNNSTMAKGLSEENVPNHEKHAVDD
PEMIASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWQRNRKRLADCAIGFGRNA
IGGRDGKYYVVTDSGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKT
IDGRGVNVHIANGACITVQFVTNIIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAI
SIFGSSHVWVDHNSLANCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKIM
QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPAN
PFAKQVTHRVEPSEGTWKSWNWRSDGDLMLNGAYFTPSGRGAGASYARASSLAAKSSSLV
GTLTSNAGALTCRRGRQC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcttggagatcatgtctatcattgctagttgtgacaatgctagtcatcaat
gtcagtgccagtaacagtcctgaagaagcaaagcaatttcagagcttaaacaactcgaca
atggcgaaagggttaagtgaagaaaacgtaccaaaccatgaaaaacatgctgtagatgat
ccagaaatgattgcttccatggtagacatgagcattcggaatagtacagaaaggaggaaa
ttgggttttttctcatgtggaactggaaatcctattgacgattgctggcgctgtgaccgc
aattggcaacgtaaccgcaagcgcctagctgattgtgctattggatttggacgcaatgcc
attggtggccgcgatggcaagtactatgttgtcactgactcgggtgacgacgaccccgta
aatcccagacctggaacacttcgtcatgctgtaattcaggacaggccattgtggattgtg
tttaaacgggacatggtcattacccttaagcaagaattgattatgaacagtttcaagaca
attgatggacgcggtgtcaatgtccacattgccaatggggcttgcataactgtccaattt
gttactaatatcattattcatggcatcaatattcatgattgtaaaccaactggtaatgcc
atggttcgtagctcgccaagtcattatggttggaggacaatggctgatggtgatgccatt
tccatctttgggtccagccacgtttgggttgatcacaactctctcgctaactgtgctgat
ggcctcattgatgctatcatgggatcgactgcgattaccatctccaacaattattttacc
caccacaatgaggtgatgctattgggtcacagcgactcctatgttagagacaagattatg
caagtgactattgcctacaaccattttggtgagggtctcattcagagaatgccaaggtgt
agacatggttatttccatgtggtgaacaatgactatacacactgggagatgtatgctatt
ggtggcagtgcttctcctacaattaacagccaaggcaacagataccttgccccagccaac
ccttttgccaaacaggtgacacatagagtggagccatcagaaggaacgtggaagagttgg
aactggagatcagatggagaccttatgcttaatggagcctactttaccccatccggacgt
ggcgctggagccagttatgctagggcatcaagcttagcagccaagtcctcttcactagtt
ggcactcttacctcaaatgctggtgcacttacctgccgcaggggccgccaatgttaa
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