Neurospora tetrasperma: NEUTE1DRAFT62227
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Entry
NEUTE1DRAFT62227 CDS
T03451
Symbol
NEUTE1DRAFT_62227
Name
(RefSeq) pre-mRNA processing splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
nte
Neurospora tetrasperma
Pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT62227 (NEUTE1DRAFT_62227)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT62227 (NEUTE1DRAFT_62227)
Spliceosome [BR:
nte03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NEUTE1DRAFT62227 (NEUTE1DRAFT_62227)
Complex C
U5 SnRNP specific factors
NEUTE1DRAFT62227 (NEUTE1DRAFT_62227)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
20828920
NCBI-ProteinID:
XP_009850520
JGI:
Neute_matA2_62227
UniProt:
F8MKB3
LinkDB
All DBs
Position
Unknown
AA seq
2309 aa
AA seq
DB search
MQRNRFGEKRKGGFVETEKADMPPEHLRKIVKDIGDVSQKKYTSDKRSYLGALKFMPHAV
LKLLENMPMPWEAAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWASMWTVMRKEKSDRR
LFKRMRFPPFDDEEPPLSWSENIEDVEPLEPIQMELDEDEEAAIYEWFYDHKPLLDTPHV
NGPSYKKWNLTLPQMASLYRLSRPLVSEVVDKNYYYLFELKSFLTAKALNAALPGGPRFE
PLYKDIDPNDEDFGEFNAMDRIIFRNPIRTECRVAYPHLYNALPRSVQLSVHSYPQVVYT
RTEDYNLPAFYFDTSINPISSRAVAPKNLTVSHEDELFGPGNIEEPEEDAFELPAGVESF
MAEESLYTDETASAIELWWAPFPFDRRSGRTVRAQDVPLVKHWYLEHCPPKQPVKVRVSY
QKLLKNYVLNELHKKHPKSLQKQNLLRTLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLL
IHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLG
NIDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNAGPVGKGPGC
GFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRA
SVMADLLDMMPEGIKQSKVNTVLQHLSEAWRCWKSNIPWKVPGLPAAIENIILRYVKSKA
DWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAV
AIYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSTKGRLNQSQREELALI
EQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPIEKISDAYLDQYLW
YQADQRHLFPAWIKPSDSEVPPLLVYKWAQGINNLDRVWETANGECNVMIETQLSKVYEK
IELTLLNSLLRLIMDHNLADYITAKNNVTLTYKDMNHVNSYGMIRGLQFSAFVFQYYGLI
LDLLLLGPQRASEIAGPPHAPNDFLQFKDRETETRHPIRLYTRYIDKIWVFLRFTADESR
DLIQRFLTEQPDPNFENVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSVTT
IEWEDTFASVYSRDNPNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLVDNTTKERTAH
AFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNLLDT
IVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWSKQTD
LGVTHYRAGMSHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTLED
LEDSWDRGLPRINTLFQKDRSTLSFDKGFRARSEFKIYQLMKSNPFWWTSQRHDGKLWNL
NAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLN
QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHE
SVVMDLCQVFDQELEALSIESVQKETIHPRKSYKMNSSCADIQLFASHKWNVTRPSLLFD
TKDVIESTTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSLYPSPTGLMIGIDL
AYNLYSAYGQYFPGLKLLIQQAMGKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQN
YSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW
AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVNLLDFPNISIRAS
ELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLILILRALHVNQ
DKTKLILRPDKTVITQDHHIWPSLSDEDWIKVETQLRDLILNDYGKKNNVNVSSLTSSEV
RDIILGMEISAPSLQRQQAAEIEKQQQEQQQLTAVTTKTQNVHGEEIIVTTTSQFEQQTF
ASKTEWRTRAIATSNLRTRANNMYVSPVDSDLDDVTYVMPKNILKRFIAIADLRVQVAGY
LYGASPADNDQVKEIKCIVMVPQIGGLRNVQLPHQLPQHEYLKDMEPLGIIHTQSGNELP
YMSAMDVTEHARLLDAHPNWDKQNTLTVAVSFTPGSVSLSAWALTPQGFKWGVENKDIAS
DQPQGFTTSMGEKRQLLLSEKFRGFFLVPDGGKWNYSFMGSAFGGLEKKPVHVKLDTPLP
FYSDQHRPIHFSSFNELEDIWVDRQDNFA
NT seq
6930 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaatcgcttcggcgagaagaggaagggcggatttgttgagacggaaaaggcc
gacatgcctccagagcacttgcggaagatcgtcaaggatattggagatgtctcgcagaaa
aagtacaccagtgacaagcgcagctatcttggggcgctcaagttcatgccccatgctgtg
ctgaagctgcttgagaacatgcccatgccttgggaggctgccagagaggtcaaggttctt
tatcacgtcaacggctgtctgaccctcgtgaatgagatcccgagagtcattgagcccgtc
ttctttgcacagtgggccagtatgtggacggtaatgcgcaaggaaaagagcgaccgccgg
ctattcaagcgcatgcgatttccacctttcgacgacgaagaaccgcccctgtcctggtcc
gagaacatcgaggacgtcgagccacttgaacccattcagatggagttggatgaggacgaa
gaagcggcaatctatgagtggttctatgaccacaagccgcttctcgacacgccccacgtc
aacggacccagttacaagaagtggaatctcaccctgccgcaaatggcgagtttataccgt
ctaagccgaccgctggtgtctgaggttgtcgacaagaactactactacctctttgagctc
aagagtttcctcacagcaaaggccctgaatgcggctttaccaggcgggcctcgcttcgag
ccactttacaaggacattgaccccaatgatgaggattttggcgagttcaatgctatggat
cgcatcatcttcaggaaccctatccgaacagagtgccgtgtagcttacccccatctttat
aatgcacttccgagaagcgtccagttgtcagtccactcatacccgcaagttgtctatacg
cgcacagaagactacaaccttcccgctttctactttgacacgagcatcaacccgatttct
tcgcgggctgttgcccccaagaaccttacagtcagccatgaagatgagctcttcggacct
ggcaacatcgaggagccggaagaggacgcgtttgagctgcccgctggcgtcgagtctttc
atggccgaggaatcgctgtatacggatgagacggcatcggccatcgagctttggtgggcg
ccgttccccttcgaccgccgctctggacgtacggttcgtgcccaggatgtacctctcgta
aagcattggtacttggagcactgcccgccgaagcagcccgtcaaggtgcgcgtctcgtac
cagaagcttctcaagaactacgtcctcaatgagctgcacaagaagcatccaaaatctctt
cagaagcaaaacttgctgcggactttgaaacagacaaagttcttccagcagacaacgatc
gattgggttgaagctggcttgcaagtctgccgacagggctttaacatgctcaacctgctt
atccaccgcaagaacctcacatatctccatttggactacaacttcaacctgaagcccgtc
aagacgctgacaaccaaggagcgaaagaagtctagattcggaaatgccttccatcttatg
cgtgaaattctgcgcttgaccaagctcattgtcgatgcccaggtacagtaccgtcttggc
aacattgacgccttccagcttgcggatggtatcctgtatgccttcaaccatgtcggacag
ttgaccggtatgtatcgttacaagtacaagttgatgcaccagatccgttcctgcaaggat
ctcaagcatctcatctactatcgcttcaacgccggcccggttggtaagggtccaggctgc
ggtttctgggcgccggcatggcgtgtgtggctcttcttcatgcgcggtatcattcccctt
cttgaaagatggcttggcaacctcctttcccgtcagttcgaaggtcgccacagcaaggga
gttgccaagaccgttaccaagcagcgtgttgaatctcacttcgatctcgagcttcgtgct
tccgtcatggctgatctgctggacatgatgccggaaggtatcaagcagagcaaggtcaac
acggttcttcaacatctttctgaggcctggagatgctggaagagtaacattccttggaag
gttcctggacttcctgcagctattgagaacatcattctgcgttacgtcaagtccaaggcc
gattggtggatttcggttgctcattacaaccgtgagcgtattcgtcggggtgccaccgtc
gataagaccgttgccaagaagaacgttggccgcctaacgcgtctgtggctcaaggccgag
caagaacgccagcacaaccacatgaaggatggtccctacgtctcttctgaggaggctgtt
gccatttacaccactacggtgcactggcttgaatcgagaaaattctctcccatccccttc
cccagtgtgtcttacaagcatgacaccaagatccttatcttggcgctggagcgcctgcgt
gaggcttactcgaccaagggaagattgaaccagagtcagcgtgaggagttggccttgatt
gagcaggcatatgacagtccaggcactaccctcgagcgtatcaaacgcttcctactcact
caaagagctttcaaggaagtcggcatcgatatgaacgacaactacagcaccatcaacccg
gtctacgatattgaaccgatcgagaagattagcgatgcttatctcgaccagtacttgtgg
tatcaagctgaccagcgccatctgttccccgcttggattaagccttccgattcggaggtg
ccacctttgcttgtgtacaagtgggctcaaggcattaacaacctcgacagggtttgggag
accgcgaatggcgagtgcaatgtcatgattgagacgcagctctccaaggtctacgagaag
attgagctgaccttgctcaactcgcttcttcggttgattatggaccacaaccttgcggac
tacatcacggccaagaataacgttaccctaacttacaaggacatgaaccatgtcaacagc
tatggtatgattcgtggcctgcagttctcagccttcgttttccagtactatggtctcatt
ctcgatttgctgttgcttggcccgcagcgtgctagcgagatcgccggtcctccccacgca
cccaatgacttcctccagttcaaggaccgggagactgaaacaagacacccgattcggttg
tacaccaggtacatcgacaagatctgggtgttcttgaggttcaccgcggatgaatctcgc
gacctaatccagcgattcttgacagagcagcctgatcccaacttcgagaacgtgattggt
tacaagagcaagaagtgctggcccagagattcgcgtatgcgtctcatgaggcacgacgtc
aacctcggcagagctgtgttctgggatctcaagaaccgcctcccaagatccgtgacgacg
attgaatgggaagacaccttcgccagcgtgtatagcagggataacccgaacctcctgttc
tccatgtgcggcttcgaagtgcgcatcttgcccaagatccgcaaccagaacgatgagttc
cctgtgaaggacagtgtctggtcgctagtggacaacacgaccaaggaacgcaccgctcac
gctttcctacaagtcaccgaagaggacattcagaaattcaataacaggatccgtcagatt
ctcatgtcgtctggctcgactacattcaccaagatcgctaacaagtggaacacggcgttg
attgccctctttacttactaccgcgaggctgctgtttcgaccgtgaacctgcttgacacg
attgtcaagtgtgaaaccaaaatccagactcgtgtcaaaattggtctcaactccaagatg
ccttcccgtttccctcctgccgttttctacactcccaaggagcttggtggcttgggtatg
atttccggatcacacattcttatccctactagcgacaagcgctggtctaaacagacagat
ctcggagttactcattaccgtgcgggcatgtcgcacgatgaggaaacgctgatccccaac
atcttccgctacatcatcccgtgggaagctgagttcatcgactcccagcgtgtgtggacg
gaatactcgcagaagcgtcttgaggccaaccagcagaaccgcagattgaccctagaggat
ctggaggacagctgggatcgcggcctgccccgtatcaacactcttttccaaaaggaccgt
agcacgttaagcttcgacaagggtttccgtgcccgttctgagttcaagatctatcagttg
atgaagagcaatcccttctggtggacaagccagaggcatgacggtaaactttggaacctt
aacgcataccgtaccgatgtcatccaggcgcttggtggtgtcgaaaccatcttggagcat
accttgttcaaggcaactggtttcccgtcttgggaaggtctcttctgggagaaggccagt
ggtttcgaggagtcgatgaagttcaagaagttgacaaatgcccagaggagcggtctcaac
cagattcctaatcgtcgtttcacgctttggtggtcacctaccatcaacagagccaatgtc
tacgttggtttccaagtgcagttggatctcactggtatcttcttgcacggcaagattcct
actctcaagatctccctgatccagatcttccgagcccatttgtggcagaagatccacgag
tcagtggtcatggatctttgccaggtcttcgatcaggagcttgaggctctaagcatcgaa
tcggtccaaaaggaaaccattcatcccagaaaatcttacaagatgaacagctcctgcgcg
gatatccagctctttgccagccacaaatggaacgtcactcgcccatcgctccttttcgat
accaaggatgtcatcgagtctactacgacaaacaagttctggattgatgttcagcttcgc
tatggtgactacgactctcacgatattgagagatacgtgagggccaagtatctggactac
accaccgacagcatgagtctttacccatctcctaccggtctcatgatcggcatcgatctg
gcttacaacttgtactctgcctacggtcaatacttcccaggcttgaagctcttgatccag
caggccatgggcaagatcatgaaggcaaaccctgcgctctacgttcttcgtgagcgtatc
cgcaagggtctgcagctctacgcctccgagagcaaccaggagttcctgaactcgcagaac
tactcggagctgttcagcaaccagactcagctctttatcgatgatactaacgtctaccgt
gttaccatccacaagaccttcgaaggtaacttgacgaccaagccgatcaacggtgccatc
ttcatcttcaacccccgtaccggtcagttgttcttgaagattattcacaccagcgtttgg
gcgggtcaaaagcgtttgggacagttggccaagtggaagactgccgaagaagtcgcagcc
cttatcagatcgctacccgtcgaagagcagccaaagcagcttatcgtcaccagaaagggt
ctgttggatcctttggaagtcaatttgcttgattttcccaacatctccatccgcgcgtcc
gagttgcagcttcccttccaggccgccatgaaggtcgaaaagctgggtgacatgatcttg
cgtgccaccgagccgcagatggttttgttcaatctctacgacgagtggctgaagagcatc
tcttcctacactgccttctcccgtctcattctcatcctgcgtgccctgcacgttaaccag
gataagacgaagctcatcttgcgccccgacaagaccgtcatcacgcaggatcatcacatc
tggccctcgctctccgatgaggactggatcaaggttgaaacgcagctccgcgaccttatc
ctcaacgactacggcaagaagaacaatgtcaacgtgtccagtttgactagcagtgaagtc
cgtgatatcattcttggtatggagatctcagccccctcgctgcagaggcagcaggccgcg
gagattgagaagcagcagcaagagcagcagcagctcaccgccgtcactaccaagacgcag
aacgtgcacggcgaggagatcattgtgacgaccacttcgcagttcgaacagcagacgttc
gcctccaagaccgagtggcgcaccagagccatcgccacctcgaacttacgcaccagggct
aacaacatgtacgtgtcgcccgtggatagtgacctggacgacgtgacctatgtcatgccc
aagaacatcctcaagcgcttcatcgccattgccgatctccgtgtccaagtcgccggttac
ctctacggtgcctcgcccgccgacaacgaccaggtcaaggagatcaagtgcatcgtcatg
gtgcctcagatcggtggtctgcgcaacgttcagctgcctcaccagcttccccagcacgag
tacctcaaggacatggagccactcggcatcattcacacacagtcgggcaacgagctgccg
tacatgtccgccatggacgttacggagcacgcacgcctgcttgatgcccacccgaattgg
gacaagcaaaacacacttaccgtcgccgtctcctttacgcccggcagcgtgtcgctgtcg
gcctgggcgctcacgcctcagggctttaagtggggcgtggagaacaaggacatagctagc
gaccagccgcaggggttcacaaccagcatgggcgaaaagcgccagctcctcctcagcgag
aagttccggggcttcttcctggtgccggatggcggcaagtggaactacagcttcatgggc
agcgcgtttggaggcctggagaaaaagccggtgcatgtcaagctggatacgccgctgccc
ttttacagcgaccagcacagacccattcacttctcgagcttcaacgagttagaggatatc
tgggttgataggcaggataactttgcctaa
DBGET
integrated database retrieval system
