Neurospora tetrasperma: NEUTE1DRAFT87125
Help
Entry
NEUTE1DRAFT87125 CDS
T03451
Symbol
NEUTE1DRAFT_87125
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nte
Neurospora tetrasperma
Pathway
nte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEUTE1DRAFT87125 (NEUTE1DRAFT_87125)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nte03019
]
NEUTE1DRAFT87125 (NEUTE1DRAFT_87125)
Messenger RNA biogenesis [BR:
nte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NEUTE1DRAFT87125 (NEUTE1DRAFT_87125)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NEUTE1DRAFT87125 (NEUTE1DRAFT_87125)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
DUF2624
Motif
Other DBs
NCBI-GeneID:
20830998
NCBI-ProteinID:
XP_009854082
JGI:
Neute_matA2_87125
UniProt:
F8MWE2
LinkDB
All DBs
Position
Unknown
AA seq
2098 aa
AA seq
DB search
MEGFRSYFQRLVVGNAGQIFPTQKWQGVNSSTYHQLVAEVKKLSQDFEQSRRIAEAIETG
TEDLFRDFDLSTFMEHFKLDAFEKTVLALAFKLGSKPDLKTKADAILSTNFPMFGNILSK
SSGTHTMLGPDFIAGLLDRFIQVHPPNFNAAAKKELEHNVQSRYIQGNPDSNPLPPSQVL
SALDLMRLLADRPPNALTLYIHKTGRDFTEIEETCYNYLRNRPANCQLSEEQVSHALMYT
TISQTPPHNPSVLVTAFRRVLPGTFRWQDVVSYFDHSGARITAPQFLRLYNALLPIAQDD
SQGFDIQRLWGGEWENPETQMSFVCAYTSLLPEQLDATTIPGLKPTFTLDDYAQAPQMIR
ETAAYAVRHPLVSEAAMSAIFNVALHSTHASKCTEAKRLFQDVVVPQVAIFVVSAFRVPK
PWPKLAEDALVDLFIESLWAAKSPETDFVMNSLWRWDKDWVKMRLIDAHAHRPICLPQIF
EHSIRQGWLEELVYLINGFGFDLTALAHAEGYLDLQEWAQKNAERSTEMASALLQFLMIK
ANLELQYQRSGPGAPKQSTTLQVRTVSAMLQILEEFLPKSPIPELIVVQRQCITAYPRLI
NYGEGFDDIIDANGRDGNSLPQAANVRMEEHYKKMYSDEVAVRTIVEVLDQYKHSRDPLE
QDTFACMIHGLFDEYAHYENYPLEALATTAVLFGGIISHKLVSELPLKIGLGMILEAVRD
HQPQEPMYKFGLQALLQLLPRLREWPGFCTQLLLIPGLQNTEASKKAEDVLREHEEETMR
ARGGTLPLGPTMGNDNMTNGNLDEAHGSEQHPLPFASVNVDPPPPGVIYEDPTAEAQGKI
QFFLNNLTETTLQTMYKDLRDMLETKHQQWFASHLVEERAKMQPNYHQVYLDLVKMFEDK
SLWAEVLRETYVSVQRMLNSEVTLQNSTERTHLKNLGGWLGLLTLARNKPIKHKNIAFKQ
LLMEAHDTKRLLIVIPFVCKVLAQGASSEVFQPPNPWLMDIIHLLIELYHNAELKLNLKF
EIEVLCKGLKLDHKSIEPSGEILNRVPVEEVPDLNGQELEPYDNTSINGMGSVAGGLPAH
ASLPIPDLSASLSIPPTEVIDQAKLHSITSQAVTRALQEIIQPVVDRSVTIAAIATQQMI
HKDFATEPDENRVRDAAINMVKSTAGSLALVTSKEPLRSNMANYLRALSAEIGLVLPEGI
IMLCINSNLDLASSVIEKSAEDRAVPEIEEMIQPEIEARRRHRAQRPNEPYMDPGLTRWA
WTIPHPFKLNPSMTGLNAEQMAIYDDFARQPRAVASTTGPSHAASTSDARSLANEVLGDQ
FNTISALPTPAETPSLPHLGGQLQHYPQGSGGLANGRQAGLNQVDARTIADRVNKLLESL
TAAATGATEEHFNELPRAHQVLDIIDALVQLIIKTQQTSEEFAAYAATQIAQLIFRQPGD
TLLLESLVHVLETLRKIAGPATSQQIRSLFHQQPAEYFLNLSLIAALLGTDLLDWRSIDA
AMSMALQQRKEGSVEFLEQLVDLTLLSESPLALYADFVRSLEEAWAWISENPDVPGGQSL
KSKILAPPPDLPEGLTPAEILAIRQDQMEYVFDEWVHLCNNPAASSSKSSTIFVQQMRSR
GVIVSTDDFLMFARLAIDKSVDRFEHVVHLNGTITEAYQAIDALGKMILIFFQSHEDNAD
GQTARAAFIDSILALGVLVLNSHHVKRGDAFNSRVFVRFFSYLLHGIHSLEELPENERDR
FMLSFAERLYDLRPSLYPGFVLGWLTLVTHRVFQPAMLQMANNAGWEAYTKILRDLLSYQ
GELLKPLELSIFAKEMYQAVLKLLIILGHDFPDYVSANHVLLCQSLPPHATQLRNMILLA
TPASAAKPTDAFQPGLKLDQIADIKEAAISVYDPAEQLRQLGLLDILDQALQNGPSEDAI
AQITHAITRSGSGTTDYGFVPIDVNRQVIDAVITHIGNFAVNRAATRNDASVFVPGAPDL
KTLQMLITELSPDTRYFVLNSMANWLRFTSAHTHYFIQVFLDFFGHDVASTDPEEMDIRQ
QIVRILLERLIGYWPYPWGLIITTMELVKNEKYNFFELPFIKATPEVRRVFEDKVRQH
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtttcggtcttactttcagcggttagtggtcggcaatgccggccaaatcttt
ccgacccaaaaatggcagggcgtcaactcgtccacctaccatcagctcgtcgcagaggtg
aagaagctatcacaagactttgagcagtccaggagaattgccgaggcgattgagacaggc
acagaagacctcttccgcgactttgatctttccaccttcatggaacatttcaagctcgat
gcttttgaaaagactgttctagcgcttgccttcaagcttgggagcaagcccgacctcaag
accaaggccgacgccatcttatcaacaaacttccccatgtttggcaacattctcagcaaa
tcgtccggcacgcatacgatgcttggacctgattttatcgctgggttgctcgatcgcttc
attcaagtccacccgcccaatttcaacgcggcagcaaagaaggagttggagcataatgtg
cagtctcgatacatccaaggaaatcccgattcgaacccgctgcctccctctcaagtgctg
tccgcacttgatctaatgcgactattggcagaccgacccccgaatgccttgactctctac
atccacaagaccgggcgagacttcaccgagattgaagagacttgctataactacctccgg
aatcgtccggcgaactgccagttgagtgaggagcaggtatcccacgcgctcatgtatacg
accatcagccaaacccctccgcataacccttcggttcttgtcacggctttcaggcgtgtt
ctgccaggtaccttcagatggcaggatgtggtctcgtactttgatcacagcggtgcccga
atcactgcgccccaatttcttcgtctctacaatgctctgctgccgatagcgcaagacgac
agccagggttttgatattcagcggctatggggtggcgagtgggaaaacccagagactcaa
atgtcctttgtctgcgcatacacctcactgctgcctgaacagctggacgccaccaccatc
ccgggcctgaagccgaccttcaccttggacgattatgcacaagcaccccagatgatccgg
gaaacggccgcatatgcagtcaggcatcccttggtatccgaagcggccatgtctgccatc
ttcaacgtcgccctccactctacacacgcctccaagtgtaccgaagccaagcgtcttttc
caggatgtcgtcgttccccaagtggccatctttgtggtctcggccttcagggtgcccaag
ccttggcccaagctagctgaggacgccctggttgacttgttcatagagtcgttatgggca
gccaaatcacccgagaccgattttgtgatgaatagcctgtggaggtgggacaaagattgg
gtcaaaatgaggttgatagatgcccacgcgcacaggccgatatgtctgccacaaatattc
gagcattccatacggcaaggctggcttgaggagcttgtctatttaatcaatggctttggg
ttcgatctcactgctctagcccacgccgagggctacctcgacttgcaggagtgggcacag
aagaacgcagaacggagtaccgagatggcctcggcccttcttcagttcctgatgatcaag
gcgaatctcgaactgcagtatcagcgttctgggcccggtgcccctaagcagagcaccacc
ctgcaggttcggacagtgtctgccatgcttcagatcctggaggagtttctgcccaagtcg
ccgatcccggagcttattgtggtccaacggcaatgtatcacggcgtacccgaggcttatc
aattacggcgaagggttcgatgacattattgacgccaacggtcgtgatggaaattcctta
ccccaggctgctaatgttagaatggaggagcactacaagaaaatgtacagcgacgaagtc
gcggtgcgaaccatcgttgaggttctcgaccagtacaagcactcgcgagatcctctcgaa
caagacacctttgcttgcatgattcacggcctattcgatgaatacgcgcattatgagaat
taccctctggaggcgctcgccaccacggctgtgctcttcggcggcatcatctctcacaag
ctcgtttcggagttgcccctcaagatcggacttggcatgatcctcgaggctgtccgggac
catcaaccccaggagcccatgtacaagtttggcttgcaagctcttcttcaactcctacct
cgcttacgcgaatggccagggttttgcacgcagctattgctcatcccgggtcttcagaat
acggaggccagcaagaaggccgaggatgttcttcgtgagcacgaggaggagacgatgcgc
gcccgcggaggcaccttaccgcttggcccgaccatgggtaacgacaacatgacaaacggt
aaccttgacgaggctcacggttcggagcagcacccactgccattcgcgtcggtcaacgtt
gatccgcctccaccgggggtgatttatgaggacccaaccgccgaggcccagggcaagatt
cagttcttcctcaacaacctcactgaaactacactgcagactatgtacaaggaccttcgc
gacatgttggagaccaagcatcagcagtggttcgctagccacctggttgaggaacgtgcc
aagatgcagccgaactaccatcaagtttaccttgacctggtaaagatgtttgaggataag
tcactgtgggccgaggttttgagggagacctatgtcagcgtccagagaatgctcaattcc
gaggttacgctgcagaactcaactgagaggacgcacttgaagaatttgggtggctggctc
ggtcttctgacgctcgcgagaaacaagcccatcaagcataagaatatcgctttcaaacag
ttacttatggaagcgcatgataccaagcgtctcctgattgttatacctttcgtctgcaag
gtcctcgctcaaggagcttcatcagaggtcttccagccacctaatccctggctgatggac
attatccatctcctgatcgagctgtaccacaacgccgagctgaagctgaacttgaagttc
gagattgaggtcttgtgcaagggcctcaagctggaccacaagagcattgagccgtctggc
gagattctcaaccgggttcctgtcgaggaagttcctgatctgaatgggcaagagcttgag
ccctacgacaacacctctattaacggtatgggtagtgtcgcgggtggcctccccgctcat
gcctctcttccgatccccgacctttccgccagcctctcgatcccgccaaccgaagtcatt
gatcaagccaaactgcacagcattacctctcaagcagttacgcgagccctgcaggagatc
atccagccagtggttgacaggtccgtgaccattgcggcgatagccacacagcaaatgatc
cataaggactttgccaccgagcctgatgagaaccgggtgcgggacgcggcgatcaacatg
gtcaagtcaactgcgggcagtcttgccctggtcacgtccaaggaaccccttcgctccaac
atggccaactaccttcgtgctctctcggctgagatcggtctagtgctgcccgagggtatt
atcatgctctgcatcaactcgaatttggatctcgcttctagcgtaatcgagaagtcggct
gaagatcgtgcggttccggagatcgaggagatgattcaacctgaaattgaagccagacgc
cggcatcgtgcgcagcgtccgaatgagccatatatggatcctggactcactcgctgggcc
tggaccattcctcatcccttcaagttgaacccaagcatgactggtcttaacgcggagcaa
atggctatctacgatgactttgcccgacagccgagggcagtcgcttcgacgacaggaccg
tcccacgcagcctccacatcggatgccaggtctctcgcaaatgaagtccttggagatcag
ttcaacactatttcggcccttcccacacctgcggagacaccttcgcttcctcacctcggt
ggtcagcttcagcactacccccagggaagtggcggattggcaaacggacgtcaagccggg
cttaaccaggtggatgccaggaccattgctgacagagtcaacaagcttttggagtcactg
accgcggccgccactggtgccaccgaggaacacttcaatgaactgccccgcgctcaccaa
gtcctggacatcattgacgctcttgtgcaactcattatcaagactcagcagacgtctgaa
gagtttgcagcatatgccgcaacccagatcgcccagttgatcttcagacagccaggcgat
accctcttgcttgaaagtctcgtccatgtcctcgaaaccctccgcaagattgccggtccg
gccacgagccagcagatcaggagcctcttccatcaacaaccagcggaatacttcctcaac
ctttcgctcattgcagcactgctcggcacggacctgctcgactggagaagcattgatgcg
gccatgtctatggccctccagcaacgcaaagagggatccgtcgagttcctcgagcagctt
gtggatcttacgctgctgagtgagagccctcttgcgctctatgctgactttgtccgcagt
ttggaggaagcatgggcctggatcagtgagaatccggatgttccaggaggccagagtctc
aagtccaagatccttgcccctcctccggacttacctgaaggccttactccggcagagatc
ctcgccatccgtcaggaccagatggagtatgtctttgacgaatgggttcacctctgcaac
aaccctgccgcctcctcctccaagtcgtcgacgatctttgtacagcagatgcgctccaga
ggagtcattgttagcactgatgatttcctcatgtttgcacgcctagccatcgacaagtct
gtggaccgcttcgagcatgttgttcacctcaatggaacgataacggaggcgtaccaggct
attgatgctttgggcaagatgatccttatcttcttccagtcccacgaagacaatgccgac
ggacaaacggctcgcgctgctttcattgattccatcctcgcccttggtgtgctggtgctg
aatagccaccacgtcaagcgtggcgacgctttcaactcaagggtgtttgttcggttcttc
tcctacctcctccacggcattcactctctagaggagctgccagaaaatgagcgtgatcgc
ttcatgcttagctttgccgagcgtctttacgacctgcggccgagcctctacccaggcttc
gtccttggctggctcacacttgtcacccaccgtgtcttccagccagccatgcttcaaatg
gctaacaacgcgggctgggaggcgtacaccaagatccttcgggatttgctctcttaccag
ggcgagctgctgaagccgctcgagctctcgatcttcgccaaggaaatgtaccaggccgtc
ctaaagctcctcatcatcctggggcatgatttccccgattacgtgtctgccaaccatgtg
ctgctgtgccagagcttgccgcctcacgcaacgcaattaaggaacatgatcttactggct
actcctgcttcggccgcgaagccgaccgatgccttccagcccggcttgaaattggatcag
atcgcagatatcaaagaagcagcgatcagtgtctacgatcctgccgagcagctacgccaa
ctggggctgcttgacattctggaccaggctttgcagaacggcccgtccgaagatgccatt
gcgcagattacacacgctatcactaggtctggtagcggaacgacggactatggcttcgtc
cctattgacgtcaaccgtcaagtcatcgacgccgtaatcacgcatattggcaactttgcc
gtcaaccgcgccgccaccaggaacgacgcctctgtgtttgtccccggcgcaccagacctc
aagacactgcaaatgctcatcacggaactctcccccgatacgaggtacttcgttctgaac
agcatggcgaactggctccgcttcaccagcgcccacacgcactatttcattcaggtcttc
cttgacttctttggccacgacgtcgcctccacggatcctgaggagatggacattcggcag
cagattgttcggatcctccttgaacggttaataggctactggccgtacccgtggggtctg
atcatcaccaccatggagctggtcaagaacgagaagtacaacttctttgagctgcctttc
atcaaggccacccctgaggtgcggagagtgtttgaggataaggttcgccagcactag
DBGET
integrated database retrieval system
