Nicotiana tomentosiformis: 104095398
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Entry
104095398 CDS
T05025
Name
(RefSeq) probable pectate lyase P59 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104095398
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104095398
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
CopC
Motif
Other DBs
NCBI-GeneID:
104095398
NCBI-ProteinID:
XP_009599825
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Position
9:73371781..73374545
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AA seq
445 aa
AA seq
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MGGPKLMYSFFFLFIIFATIIPCLMAHIGDFDEVWRRRAEEAREYARQIYEPNPENVTLA
FNQKVRDSMKEVTVSNNSTRRGLGTKKYKGPCMVTNPIDRCWRCDPNWADNRKRLADCAM
GFGSKATGGKDGEIYIVTDNSDDYAEPKPGTLRYAVIQKEPLWIIFERSMTIRLHQELIM
QSDKTIDARGANVHIAKGAGITLQYIKNVIIHGLHIHDIVEGSGGMVRDAVDHIGIRTVS
DGDGISIFGASNIWIDHVSMRKCYDGIIDAVEGSTAITISNGHFTDHNEVMLFGASDSSS
IDQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGNRF
IAPPDIFKKQVTKREYNPEEVWKHWTWRSEGNLFMNGAYFIESGDPDWSKKHKELYDGIS
AAPAEEVTWITRFAGALGCKKGKAC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctaagttaatgtattcgttcttctttctatttatcatttttgctacaata
ataccgtgcctaatggctcacattggtgacttcgacgaggtgtggcggaggagagccgaa
gaagctagagaatacgcccgtcagatttatgagcccaaccctgaaaatgtcacccttgca
tttaatcagaaagttcgcgatagtatgaaggaagtgacagttagcaataatagcacaagg
aggggtctagggacgaaaaagtacaaaggaccttgcatggtcacaaatccaattgatagg
tgctggagatgtgaccctaattgggctgacaataggaaaaggctagcagattgtgcaatg
ggctttggatccaaggccaccggtgggaaggatggcgaaatctacatcgtcaccgacaat
tcagacgattatgctgaaccaaaacctggaactcttcgttatgccgttatccaaaaggag
ccattgtggatcatattcgaaagaagtatgaccatcaggttacaccaggagctgataatg
cagagtgacaagactatcgatgctcgtggggctaacgttcatattgctaaaggtgctggc
attaccctccagtacatcaagaacgtgatcatccacggactccatattcatgacattgtc
gaaggaagtggtgggatggttcgtgacgcagtggaccatattggcatacgtactgttagt
gatggagatggcatttctatttttggtgcctccaatatatggattgatcatgtctctatg
aggaaatgctatgatggaatcatagacgctgtggaaggatccactgctatcactatatcc
aatggacatttcactgatcataatgaggtcatgttgtttggtgcaagtgacagttcttca
atagatcaagttatgcaaatcacattagctttcaatcattttggaaagagattggtgcag
agaatgccaaggtgccgatggggatatattcatgttgttaacaatgactatactcactgg
aatatgtatgccattggtggtagcatgcatcccactatcattacccagggtaatcgtttt
attgcccctcctgacatcttcaagaaacaggtaacaaagagggagtacaacccagaagaa
gtgtggaagcactggacatggagatcagagggaaatctattcatgaatggtgcatacttc
attgaatctggtgatccagattggtccaagaaacacaaagagctttatgacggaatatca
gctgccccagctgaagaagtcacttggataactagatttgcaggtgcacttggctgcaaa
aaaggaaaggcttgttaa
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