KEGG   Nicotiana tomentosiformis: 104098387
Entry
104098387         CDS       T05025                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03013  Nucleocytoplasmic transport
nto04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104098387
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104098387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104098387
   04131 Membrane trafficking [BR:nto04131]
    104098387
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104098387
Membrane trafficking [BR:nto04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104098387
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104098387
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104098387
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 104098387
NCBI-ProteinID: XP_009603401
LinkDB
Position
6:52448526..52449092
AA seq 183 aa
MHVQKIETGHNDIVHDVSMDYYGKRMATSSSDMTIKIVGVSNNSASQHLATLSGHTGHVW
QVAWTHPKFGSILASCSYDGKVVIWKEGNQNEWTQAHVFGDHKSSVNSISWAPHELGLCL
GCGSSDGSISVHTARSDGLWDTTKIDQAHPVGVTTVSWAPSMAPGALVGSAVLEPVQKLA
TCS
NT seq 552 nt   +upstreamnt  +downstreamnt
atgcatgtacagaagattgaaacaggtcacaatgacatagttcacgatgtttccatggac
tattatgggaaacgtatggccacatcatcatctgatatgaccataaaaatagttggagtc
agcaacaactcagcttcacagcatcttgccactctgagtggccatactggtcatgtttgg
caagttgcttggacacaccccaaatttggctcaatccttgcttcctgttcctatgatggt
aaagttgtaatctggaaggaaggcaatcaaaatgagtggacacaagctcatgtttttggc
gaccataaatcatcagttaactctatttcatgggctcctcatgaacttgggctatgcttg
ggttgtggttcttctgatggtagtatctcagttcacactgctaggtcagatggtctttgg
gacactacaaaaattgaccaagcccatccagttggggtaacaacagtctcatgggcgcca
tcaatggctcctggtgctttagttggttcagctgttcttgaacctgttcagaagcttgca
acctgttcttga

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