Nicotiana tomentosiformis: 104102115
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Entry
104102115 CDS
T05025
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104102115
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nto04812
]
104102115
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104102115
Cytoskeleton proteins [BR:
nto04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104102115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_GCN1
HEAT_EZ
HEAT_GCN1_C
Vac14_Fab1_bd
HEAT_2
TPR_DNAAF5
TOR1L1_N
HEAT_MROH2B_C
HEAT_Maestro
TPR_IMB1
Adaptin_N
UTP20
MMS19_C
INTS1_R4
VPS15-like_hel
RRP12_HEAT
HEAT_DAAF5
Dopey_N
Rrn6_HB
SEN1_N
Motif
Other DBs
NCBI-GeneID:
104102115
NCBI-ProteinID:
XP_009608034
LinkDB
All DBs
Position
2:complement(187570375..187583686)
Genome browser
AA seq
1422 aa
AA seq
DB search
MEAALELARAKDTKSRMAGVEHLHTLLEASRKTLSSSEVTSLVDVCLDLLKDNNFRVSQG
ALMSLASAAVLSGEYFKLHFNALLPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSCAWMHKSFKVREEFARTLTSAIGLFASTELPLQRAILPPILQMLNDPNHGVREAAI
SCIEEMYSEIGPQFRDELQRHHLPSMLLKDINARLEKIEPKSRSTDGISSNYSAGEVRSA
SLNSKKSSPKAKRSTREVSLFGGDSDITEKPVDPIKVYSEKELIREFENIASTLVPEKDW
SIRIAAMQRVEALVIGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIIKQACHLLNFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVGRALPRIADSAKNDRN
AVLRARCCEYALLILEHWPDASEVQRSAELYEDLIKCCVADAMSEVRSTARTLYRMFART
WPERSRRLFMSFDPAIQRIINEEDGGIHKRHASPSVRERSSQFSLASQTSASSHLPGYGT
SAIVAMDRSANLSSGTSLSSGLLLPQAKPVGVERSLESVLHASKQKVSAIENLLKGLDVS
EKSRSSSLDLGVDPPSSRDPPFPLAVPASTSLTNALLVDAPSAMTKGNNRSGGLVLSDII
TQIQASKDSAKASYRSSTDHESFSALNSYTARRASEKPQDRGLVEENAELRDIRRFMNSR
ADRQYLETPYRDTNFRDSHNNHVPNFQRPLLKKNAAGRMSASRRRSFDDSQLPLGDVSSY
VDGPASLNDALSEGLSSTSDWKARVAAFSYLRSLLQQGPRGIQETTQSFEKVMKLFFQHL
DDPHHKVAQAALSTLADLIPACRKPFESYVERILPHVFSRLIDPKELVRQPCSTTLEIVS
KTYGIDTLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHPSNSEGAANIGILKLWLAKLT
PLIHDKNTKLKEAAISCIISMYTHFDSTAVLNFILSLSVEEQNSLRRALKKCTPRIEVDL
MNFLQSKKDRQRSKSSYDPSDVVGTSSEEGYIGTSTKSNLFGRYSGGAVDSDSIRKWNSL
QDPTYMTRSTGQLSDGTQDFYCGVETGSNTDPTVSKAKDLKFGALSTSENNALWTLESKD
NSSNIEQTSIPHLDGNELVDNGSSSNLGPNHLKLSALKINSTLETGPSIPHILHLICNGN
DGSPSANKRDALEQLVEASVANDQSIWSKYFNQILTAVLEVLDDSESLTRELALSLILEM
LKNQKNAMEDSVEIIIEKLLHVTKDDVAKVANEAENCLTTILSQYDPFRCLSVIVPLLVT
EDEKTLVTCINSLTKLVGRLSQEELMSQLPSFLPSLFDAFGNQSADVRKTVVFCLVDIYI
MLGKAFMPYLEGLNSTQLRLVTIYANRISQARTGTPVEASQS
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggagttggcgcgtgcaaaggacacgaagtctcgaatggcgggagta
gaacatctccacacacttctagaagcttcgcgaaaaaccctatcgtcttccgaagtcacc
tcgctcgtcgacgtctgcttagatctcttaaaagacaacaattttagggtttctcaaggc
gcacttatgtcgcttgcgtctgctgctgttctctccggtgaatacttcaagcttcacttc
aatgcgctcttgccagctgttgtcgaacgattgggcgatgcaaaacagcccgttagagat
gccgcgaggcggttattgcttaccttaatggaggtttcttcaccaacaattatagttgag
agagctgggtcttgtgcttggatgcacaaaagctttaaagttcgagaagaatttgctcgt
actcttacatcggcaattggtctttttgcatcgaccgagctgccccttcaacgggctatt
cttcctcctattttgcaaatgttgaatgatcctaatcatggagtaagggaagcagccata
tcatgtattgaggagatgtattcagagattggaccccagttccgcgatgagcttcagcgc
catcatcttccttccatgttgctaaaagatattaatgccagacttgagaagattgagcct
aaaagtcgatctactgatggaatctcaagtaattattcagctggtgaggtgagatctgct
agccttaattccaagaaaagcagtcctaaggcaaagcgttcaacaagagaggtgtctctc
tttggaggggatagtgatattacagaaaagcctgtcgatccaattaaagtgtattcagaa
aaggaactgataagggaattcgagaatattgcctctacccttgtaccagagaaagattgg
tctatccgtattgccgctatgcagagagttgaagcacttgttattggaggtgcagctgat
tatccttgttttcgtggacttctaaagcaacttgttggccctttgagcacacagttatct
gataggagatccagcataataaaacaggcatgtcacttactgaacttcttatcaaaagag
ctgttgggagattttgaggcatgtgctgagatgttcattccggttcttttcaagcttgtt
gtgataactgttcttgtaattgcagaatctgctgataactgcataaagacgatgttgcgc
aactgcaaagttggtcgagcacttcctcgtatagctgattctgcaaagaatgacagaaat
gcagtacttcgtgcaagatgctgtgagtatgcacttctgatccttgaacattggcctgat
gcatctgaggtacaacgttcagctgagctttatgaagaccttataaaatgttgtgtcgct
gatgcaatgagtgaggtacgatcaactgcaagaactttgtacagaatgtttgcaagaact
tggccagaacgttctaggcgtttgtttatgtcctttgatcctgctatccaaaggatcata
aatgaggaagatggtggtattcataaacgacatgcttctccctctgttcgagaaaggagt
tcacagttctcacttgcttctcaaacatctgcttcttcacatctacctggttatggaacg
tctgcaatagttgccatggatagaagtgctaatttgtcttcagggacgtccttgtcctct
gggctgcttttgccacaagcaaagcctgtgggagtggaacgtagcctggaaagtgtactt
catgctagtaaacagaaagtttctgctatagaaaacctgctcaaagggctagatgtatct
gagaaaagtcgctcctctagtttggatctaggagttgacccgccctcatcccgtgatcca
ccgttccctcttgctgttcctgcatcaactagtcttactaatgctttactggttgatgca
ccatctgctatgactaaaggaaataatcgcagtggtgggttggttttgtctgatatcatc
actcagatccaggcctcaaaggattcagctaaagcatcatatcgaagtagtacggatcat
gagtctttttctgcactcaactcctacactgcaagaagagcttctgagaaaccacaggat
agaggacttgttgaagagaatgctgagctgagagacattaggcggtttatgaactctcgt
gctgacagacaatacttagagacaccgtacagagatactaactttagggactcccataat
aatcatgttcccaattttcaacgtcctctcttaaaaaagaatgcagcaggaagaatgtca
gctagcaggaggaggagctttgatgacagtcagcttccactaggagatgtatctagttat
gtggatggtccagcttcactaaatgatgcattaagtgagggtctcagttctacttcagat
tggaaagccagggttgctgcattcagctatctccggtctttgctacagcagggccctaga
ggtattcaagaaacaactcagagttttgagaaggttatgaaattgtttttccagcatctt
gatgatccccatcataaggtcgcacaggcagcactttcaacccttgcagatcttattcct
gcttgcagaaagccatttgaaagttatgtagagaggatcttgccacatgttttctcacgg
ttaattgatcccaaggaattggtgaggcagccctgctcaactacccttgaaatagttagc
aagacatatgggatagatacccttttgccagctttgctccgttcattagatgaacagcgg
tccccaaaggctaaactcgcagtaattgagtttgcaattggctcatttaacaagcatcct
tcaaattctgaaggtgctgctaacattggcatcctcaagttatggcttgctaagttgaca
ccattgatccatgataagaataccaaactgaaagaagcagctatttcgtgcattatatca
atgtacacacacttcgactcgacagcagttctcaatttcattcttagcttatcggttgaa
gaacaaaattccttaagacgggctcttaaaaagtgcacgcctcgtatagaagtggatttg
atgaatttcctgcagagcaagaaagatagacaacgttccaagtcttcttatgatccatct
gatgttgttggaacatcatctgaagagggatatattggcacttcaacgaagagtaatcta
tttggaaggtattctgggggtgcagttgattctgatagcatcagaaagtggaattctctt
caagacccaacctatatgactagatctactggtcagttgtctgatggtactcaggacttc
tattgtggtgtggaaactggttccaacactgatcctactgtttcaaaagccaaggatttg
aaatttggggccctttccacaagtgagaataacgcattatggacattggaaagcaaggat
aacagctcaaacatagaacagacctccattcctcatctggacggcaatgagctagttgat
aatggatcttcatctaatctggggcctaatcacctaaaactctctgctctcaagataaat
tcaactctagaaactggaccaagcatccctcatattcttcacttgatttgcaatggtaat
gatggaagtccttctgctaacaagcgtgatgcacttgaacaattggtcgaagcttctgtt
gctaatgatcaatccatctggagcaagtacttcaatcagatattaactgctgtgcttgag
gtgttagatgattctgagtcattgacaagggaacttgccctatctctgattcttgaaatg
ctgaagaatcagaaaaatgctatggaggactcagttgagatcataattgaaaagctgctc
cacgtgaccaaggatgatgttgcaaaagttgcgaatgaagccgagaattgtttaactaca
attttgtcccagtacgacccgttcagatgcttaagtgttattgttcctttgcttgtcacc
gaagacgagaagactcttgtaacttgtataaattcgttgacaaagcttgttgggaggctc
tcccaggaggaattgatgtctcagctaccttcattcttgccttccctgtttgatgctttt
ggaaaccagagtgctgatgtccgcaagactgttgttttctgtttggttgacatatacatc
atgctgggcaaagcatttatgccatacttggaagggctgaacagcacgcagttacgattg
gtgaccatttatgcaaatcgaatatcacaggccagaactggtactcctgtagaggcaagc
caaagttag
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