Nicotiana tomentosiformis: 104105230
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Entry
104105230 CDS
T05025
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104105230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104105230
03012 Translation factors [BR:
nto03012
]
104105230
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104105230
Translation factors [BR:
nto03012
]
Eukaryotic type
Release factors
104105230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Motif
Other DBs
NCBI-GeneID:
104105230
NCBI-ProteinID:
XP_009611781
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All DBs
Position
5:23669631..23674890
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AA seq
437 aa
AA seq
DB search
MADGQENDKNIEIWKMKKLIKALQSARGNGTSMISLIIPPGDQISRITKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLLLYTGTIVTDDGKEKKVTFDLTPFKPIN
ASLYLCDNKFHTEPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKGLEMGAVETLIVWENLDINRYVLKNSVTNEIVVKHLNKDGEADQSNFKD
PATSAELEVQDKMPLLEWFANEYKTFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDM
RSFDEPSDEGEYFEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggccaagaaaatgataagaatattgaaatatggaaaatgaaaaagttaatc
aaagccctacaatctgccagaggaaatggcacgagcatgatctctcttatcataccccct
ggtgatcagatatctcgtattaccaagatgctggcagaagaatacggtactgcctcaaat
attaagagcagagtaaaccgtcagtctgtgctcggtgcaataacgtctgctcaacagagg
cttaaactgtataacaaagttcctcctaatggattgctgctttatactggaactatagtg
acagatgatgggaaggaaaagaaggtcacctttgatcttacgccttttaaacccataaat
gcgtctctctacttatgtgacaacaagtttcataccgaacctctgggtgaattattggaa
tctgatgagaagtttggtttcattgttatggatggtaatggcaccctttttgggacctta
agcggcaatacacgagaagttcttcataagttcactgtcgaccttccaaagaagcacgga
agaggaggtcaatcagctcttcgatttgctcgtcttcgaatggagaaacgccataattat
gtgaggaagacagcagagcttgctactcaattcttcattaatccagccactagccagcca
aatgtatctggactaatacttgctgggtcggctgatttcaagaccgagctaagccaatct
gatatgtttgatccgcgcctacaagcaaagatacttaacgtggtcgatgtgtcctatggt
ggggaaaatggcttcaatcaggcaatcgagctgtccgctgagattctggctaatgtgaag
tttatacaagaaaagcgcttgataggaaaattctttgaggaaatcagtcaagatactgga
aagtatgtgttcggtgtggatgacacaataaaaggtttggagatgggagctgttgaaact
cttattgtgtgggaaaatcttgatataaaccgatacgtactgaaaaatagtgtgactaat
gagattgtcgttaagcacctaaacaaggacggagaggccgatcaaagcaacttcaaggat
cctgccacatcagctgaattggaggttcaggacaaaatgccgctgctcgagtggtttgca
aatgaatacaaaacttttggttgttcgcttgagtttgtcactaacaggtctcaagagggg
tcacagttttgcagaggatttggtggcattggggggatccttcgttaccagcttgacatg
cgttccttcgatgagccatctgatgaaggagaatactttgaggattccgattaa
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