KEGG   Nicotiana tomentosiformis: 104106409
Entry
104106409         CDS       T05025                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104106409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104106409
   04131 Membrane trafficking [BR:nto04131]
    104106409
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104106409
Membrane trafficking [BR:nto04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104106409
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR5 ANAPC4_WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_Aladin Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 104106409
NCBI-ProteinID: XP_009613245
LinkDB
Position
8:139716126..139723044
AA seq 325 aa
MDKTIINLDKGTTCTAWNFSGQRLAAGSTDGNLSIFDSTDPASSVFTCSSKFKVHESSIV
KIIWAPPEYGDAVACICADGSLLLWEEVVEDSELLQWKLCKCFDRISSQVLDVQFGVSKT
SLKLVAAYSDGQVKVFELLDPFELKNWQLQAEFQNVIESVSKFGNVSCRSASIAWNPLKG
EIQQSSFVLGFNSDMPHMNSSKVWEFDQDHQRWLPVAELALPADKGDPVSTVAWAPNIGR
PYELIAVSTSKEIAIWHVGSNPDPNGRLSVEKVATLSTHDSEVWQMEWDMSGMTLATTGS
DDVVRLWQSDLNGVWHEQAVLEPTS
NT seq 978 nt   +upstreamnt  +downstreamnt
atggacaaaactattataaatttggacaaaggtacaacatgtactgcttggaatttttcg
ggtcagagattagcagctggttctactgacggcaatttgtccatctttgattctactgac
cctgcttcttctgttttcacttgctcttctaaatttaaggtgcatgaatccagcattgta
aaaattatttgggctccaccagaatatggagatgcagttgcatgcatttgtgctgatgga
agtttgttgttgtgggaggaggtggttgaagattcagagctacttcagtggaagctgtgc
aaatgctttgacagaatctcatctcaagttctggatgttcagtttggagtctccaagaca
agtctgaaattggttgccgcatattcagatggccaagtaaaagtgtttgagctcctagat
ccatttgaattgaagaactggcagctacaggctgaatttcagaatgtcattgaatctgta
tctaaatttggaaacgtctcatgccgatctgcttctattgcttggaatcctttaaaagga
gaaattcagcaatcaagctttgttttgggttttaattctgacatgccacacatgaactcc
tccaaggtttgggaattcgatcaggatcatcagagatggcttccagttgcggaattagct
ttacctgcagataaaggtgatccagtctctacagttgcatgggcaccaaatattggaagg
ccgtacgagttaatagcagtttctacttccaaggaaattgcaatatggcatgttggatca
aatcctgaccccaatggaaggctctcggtggagaaggttgccacgctctctactcatgac
agcgaggtatggcagatggaatgggacatgagcgggatgacacttgctactactgggagc
gatgatgtagttcgcttgtggcagtccgacttgaatggggtttggcatgaacaagcggta
ttagagcccactagctag

DBGET integrated database retrieval system