Nicotiana tomentosiformis: 104106409
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Entry
104106409 CDS
T05025
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104106409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104106409
04131 Membrane trafficking [BR:
nto04131
]
104106409
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104106409
Membrane trafficking [BR:
nto04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104106409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104106409
NCBI-ProteinID:
XP_009613245
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Position
8:139716126..139723044
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AA seq
325 aa
AA seq
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MDKTIINLDKGTTCTAWNFSGQRLAAGSTDGNLSIFDSTDPASSVFTCSSKFKVHESSIV
KIIWAPPEYGDAVACICADGSLLLWEEVVEDSELLQWKLCKCFDRISSQVLDVQFGVSKT
SLKLVAAYSDGQVKVFELLDPFELKNWQLQAEFQNVIESVSKFGNVSCRSASIAWNPLKG
EIQQSSFVLGFNSDMPHMNSSKVWEFDQDHQRWLPVAELALPADKGDPVSTVAWAPNIGR
PYELIAVSTSKEIAIWHVGSNPDPNGRLSVEKVATLSTHDSEVWQMEWDMSGMTLATTGS
DDVVRLWQSDLNGVWHEQAVLEPTS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaactattataaatttggacaaaggtacaacatgtactgcttggaatttttcg
ggtcagagattagcagctggttctactgacggcaatttgtccatctttgattctactgac
cctgcttcttctgttttcacttgctcttctaaatttaaggtgcatgaatccagcattgta
aaaattatttgggctccaccagaatatggagatgcagttgcatgcatttgtgctgatgga
agtttgttgttgtgggaggaggtggttgaagattcagagctacttcagtggaagctgtgc
aaatgctttgacagaatctcatctcaagttctggatgttcagtttggagtctccaagaca
agtctgaaattggttgccgcatattcagatggccaagtaaaagtgtttgagctcctagat
ccatttgaattgaagaactggcagctacaggctgaatttcagaatgtcattgaatctgta
tctaaatttggaaacgtctcatgccgatctgcttctattgcttggaatcctttaaaagga
gaaattcagcaatcaagctttgttttgggttttaattctgacatgccacacatgaactcc
tccaaggtttgggaattcgatcaggatcatcagagatggcttccagttgcggaattagct
ttacctgcagataaaggtgatccagtctctacagttgcatgggcaccaaatattggaagg
ccgtacgagttaatagcagtttctacttccaaggaaattgcaatatggcatgttggatca
aatcctgaccccaatggaaggctctcggtggagaaggttgccacgctctctactcatgac
agcgaggtatggcagatggaatgggacatgagcgggatgacacttgctactactgggagc
gatgatgtagttcgcttgtggcagtccgacttgaatggggtttggcatgaacaagcggta
ttagagcccactagctag
DBGET
integrated database retrieval system