Nicotiana tomentosiformis: 104110439
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Entry
104110439 CDS
T05025
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104110439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104110439
Ubiquitin system [BR:
nto04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
104110439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Plexin_RBD
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
104110439
NCBI-ProteinID:
XP_070048152
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All DBs
Position
1:complement(145437929..145440318)
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AA seq
476 aa
AA seq
DB search
MELVLSPASWAPMNEQKVQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN
VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT
GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL
VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG
RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP
PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD
TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaattagtattatctcctgcaagttgggcaccaatgaacgaacaaaaggtacagatg
cagatctttgtgaagaccctgactggcaagactataactctcgaagttgagagttcagac
acgatcgacaatgttaaagccaaaatccaggacaaagaaggtattccaccagatcaacaa
cgtttgatctttgcaggaaaacagctcgaggatgggcgtactctcgcagattacaatatt
caaaaggagtcgacacttcaccttgttcttcgcctccgtggtggaatgcaaatcttcgtt
aaaaccttaaccgggaaaacaatcacattggaagttgagagctcggacactattgataat
gttaaggcgaaaattcaagataaggaaggtattccaccggaccaacaaaggttgattttt
gcggggaagcaattggaagatgggcgcactctggcagattataatattcaaaaggagtca
acacttcacctagtcctccgccttcgtggtggaatgcaaatttttgttaagaccttaact
ggaaaaacaatcacgttggaggttgagagctcggacacgatagacaatgttaaggctaaa
attcaagacaaggagggtatcccacctgatcagcagaggttgatttttgctgggaagcaa
ttagaagatggaagaactctggctgattataacatccagaaggaatccacccttcacctt
gttctcaggttgaggggtggcatgcagatctttgtgaagactttgacggggaagacgatc
acgttggaggtggagagttccgataccattgataatgtgaaggccaagatacaggataag
gagggtatcccaccagaccagcagagactgatttttgcagggaaacaattggaagatgga
aggactctcgcagattataatattcaaaaggaatctacccttcaccttgttctcaggcta
aggggtggaatgcaaatctttgttaagaccttaactggaaaaaccatcacattggaagtt
gagagctcagacacgattgacaatgtgaaggcgaagatacaggataaagaaggtattccg
ccggaccagcagaggctcatctttgctggaaaacagttggaggatggtaggacacttgct
gactataacattcaaaaggagtcaacactccacctagtcctccgccttcgtggtggaatg
caaatctttgttaaaaccttaacgggaaagaccatcacattggaagttgagagctcagac
acgattgacaatgtgaaggcgaagatacaggataaagaaggtattccaccggaccagcag
aggctcatctttgctggaaaacagttggaggatggtaggacactggcggactacaatatc
cagaaggagtctactctccatcttgtgctgaggctgaggggtggattttaa
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