Nicotiana tomentosiformis: 104120434
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Entry
104120434 CDS
T05025
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104120434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104120434
03012 Translation factors [BR:
nto03012
]
104120434
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104120434
Translation factors [BR:
nto03012
]
Eukaryotic type
Release factors
104120434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
104120434
NCBI-ProteinID:
XP_009630489
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Position
6:complement(769986..773490)
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AA seq
437 aa
AA seq
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MSDGQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKVLEMGAIETLIVWENLDITRYVLKNSSSGETIIKHLNKEQDADQSNFRD
PATNAELEVQDKLSLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDV
RAFDELSDDGEVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatggtcaggagagtgataaaaacattgaaatatggaagattaaaaaactcatc
aaggcactggaagctgctagaggcaatggcaccagcatgatttcacttatcatgcctcca
cgtgatcaagtatctcgtgttaccaagatgcttggagatgaatttggtacagcatcaaat
attaagagcagggtgaatcgccaatctgtgcttggtgcaatcacatctgctcagcagagg
cttaaactctacaacaaggttccaccgaatgggctcgtcctttacactggaacaattgtg
actgatgatgggaaagagaagaaggttactattgattttgagcccttcaagcccattaat
gcatcactctatctttgtgataacaagttccacacagaagctttgaatgaacttttggaa
tctgatgacaaatttggatttatagtgatggacgggaatggtactctttttgggacattg
agtggcaacacccgagaggtccttcataagtttagcgttgatttgcccaaaaagcacgga
agaggaggacaatcagccttgcgttttgctcgtctccggatggagaaacggcacaactat
gtgagaaaaacagcagagcttgcaactcaattttatataaatcctgccaccagccagccc
aatgtttctggcctgatattagctggatctgctgactttaaaacagagctcagtcagtct
gatatgtttgatcctcgtcttcaggcgaagattttaaatgtggttgacgtttcttatgga
ggggaaaatggtttcaaccaagcaattgagctgtctgctgagatcttagccaatgtgaag
tttatacaagagaagaaattgataggcaagtattttgaggagattagtcaggacactgga
aagtatgtctttggtgttgatgatacattgaaagttctggaaatgggtgctattgagacg
cttattgtgtgggaaaatctggatattacaaggtatgtgctgaaaaatagcagttctgga
gaaactatcatcaaacacttgaacaaagagcaagatgctgatcagagtaacttccgtgat
cctgctacaaatgctgaattagaggttcaggacaagctgtcgctgcttgagtggtttgct
aatgagtacaggagatttggttgcagtctggaatttgtcaccaacaagtcacaagaagga
tctcagttttgccgaggttttggtggcattggaggaatcctccgctatcagctggatgtt
cgggcttttgatgagctctctgatgatggggaagtttacgaagattctgactag
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