Nicotiana tomentosiformis: 104120652
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Entry
104120652 CDS
T05025
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104120652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104120652
03009 Ribosome biogenesis [BR:
nto03009
]
104120652
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104120652
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
104120652
Pre-60S particles
104120652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
TPR_IMB1
HEAT_2
HEAT_MROH2B_C
TOR1L1_N
TPR_DNAAF5
HEAT_Maestro
TIP120
HEAT_PBS
Usg
UTP20_N
Motif
Other DBs
NCBI-GeneID:
104120652
NCBI-ProteinID:
XP_070052917
LinkDB
All DBs
Position
3:complement(25991722..26025467)
Genome browser
AA seq
895 aa
AA seq
DB search
MAATASSTWQPQEEGFKEICGLLEQQMSPATSDKSQIWQQLQHYSHFPDFNNYLTFIFAR
AEGKSVDIRQAAGLLLKNNLRAAFKNMPLANQQYIKSELLPSLGATDRHIRSTAGTIISV
LVQIEGFAGWPELLHALVSGLDSNDSNHMEGGMDALSKICEDVPSLLDSDIPGLSERPIT
ILLPRFLQLFQSPHASLRKLSLSSVNQFIMLMPTVLLLSMDKYLQGLFLLANDPAPDVRK
LVCMAFVQLVEVRPAFLEPHLRNIIEYILQVNKDPDDEVALEACEFWSAYCDAPQLPPEN
LRELLPRLIPVLLSNMVYADDDESLLEAEEDGSLPDHDQDLKPRFHSSRFHGSEDGEDDD
EDIVNLWNLRKCSAAALDILSNVFGDDILPTLMPVVQAKLSATGDEAWKEREAAVLALGA
IGEGCINGLFPHLSEIITFLIPLLDDKFPLIRSISCWTLSRFSKYIVQVTDHQEGREQFN
NILMGILRRVLDDNKRVQEAACSAFATLEEEAAEELAPCLDIILQHLMCAFKKYQRRNLR
IVYDAIGTLADAVGEELNQPRYLEILMPPLIEKWQQLPNSDKDLFPLLECFTSIAQALGT
GFAPFAQPVFLRCITIIQSQQLAKVDPVSAGFQYDKEFIVCSLDLLSGLAEGLGSSIESL
VSQSNLRDLLLQCCFNDAPDVRQSAFALLGDLAKVCPVHLHPRLAEFLDAAAKQLNTSKP
VEKETISVVNNACWAIGELAIKVPKEISPIVLTVVSCLVPILQHAEGLNKSLIENSAITL
GRLAWVCPELVSPHMEHFMQAWCIALSMIRDDIEKEEAFRGLCAVVKANPSGALNSLVFM
CKAIASWHEIESEDLHNEICQVLHGYKQMLKNGAWEQCMSALEPSVKGKLLKYQV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcgagttcaacatggcagccgcaggaggaagggttcaaagagatctgt
ggattattggagcaacaaatgtctcctgctacttccgataagtctcagatttggcaacaa
cttcaacactactctcacttccctgatttcaataactatctcacttttatcttcgcccgt
gctgaggggaagtcagtcgacattcggcaagcagctgggttgcttttaaaaaataacctg
agagctgcattcaaaaacatgcctctcgccaaccagcaatacataaaatcagagttgtta
ccttctctaggggcgacagataggcacataaggtctacagctggaaccattataagtgtt
cttgtacaaatagagggatttgctggatggccggagttgctgcatgctcttgtcagtggc
ttggacagtaacgacagtaatcacatggagggtggcatggatgctttatccaagatatgc
gaggatgtgccaagtcttcttgattctgatatacctggattatctgaacgaccaataact
attctccttccaaggtttcttcagcttttccagtcacctcatgcttctctcagaaagctt
tcattgagttctgtgaatcaatttattatgctgatgcctacagttttacttttatctatg
gataaatatcttcaagggttgtttcttcttgccaatgaccctgctccagatgtgcggaag
ttggtttgtatggcatttgttcaactggttgaagttcgtcctgcgtttttggagcctcac
ttgagaaatatcatagaatatattttgcaagtcaacaaggatccagatgatgaggtggcg
cttgaagcctgtgagttctggtccgcatattgtgatgctcctcagttgccacctgagaac
ttaagagaactcttgccacgtttgattccagttttgctgtctaacatggtatatgctgat
gatgacgagtcgcttttggaggcagaggaggatggatctctcccagaccatgatcaggat
ctcaagcctcgatttcattcttcacgttttcatggttcagaggatggtgaagatgatgac
gaggacattgtaaacttgtggaacttacggaagtgcagtgcagctgctctagatattctt
tcaaatgtattcggggatgacattctgccgacattgatgcctgtggttcaggctaaattg
tctgctacaggagatgaagcttggaaggaaagggaagcagcagtattagctcttggtgcc
ataggtgaaggctgcataaatggactctttcctcatttgtcagagattattacgtttctc
atcccgcttttagacgacaagtttcctttaatacgaagcatctcttgttggactctatca
cgcttcagcaaatatattgttcaggtgacagatcatcaagaaggacgtgaacaattcaac
aatattctaatgggtattctgcgaagagtattggatgataataaacgagtgcaagaggct
gcttgttcagcttttgctacccttgaagaggaggctgcggaagagttggcaccatgcttg
gatatcattttgcagcacctgatgtgtgcatttaaaaaataccagagacggaaccttaga
attgtttatgatgccattggaacattggcggatgctgttggagaggaactaaatcagccc
aggtaccttgagattttaatgcccccattaattgaaaagtggcagcaacttccaaattca
gacaaagatctctttccactgctggagtgttttacctcgatagctcaggctttgggtact
ggatttgcaccatttgctcagcccgtatttctgaggtgcataaccatcattcagtcacaa
caattggcaaaggttgatcctgtttcagctggttttcaatatgataaagaattcattgtt
tgttctttggacctgctctctggacttgctgaaggtcttggtagtagtatagaaagcctg
gtttcacaaagtaatttaagggatttgcttctgcaatgttgctttaatgatgctccagat
gttcggcagagtgcctttgcattgcttggtgaccttgcaaaggtttgtcctgttcattta
catcctcgtttggccgaatttcttgatgctgctgctaagcaactgaacacttccaagcca
gttgagaaggaaacaatttctgtggtcaacaatgcatgctgggcaattggagagttagct
atcaaggttcccaaggagatatctccaatagtcttgactgtagtatcatgcttagtgcca
attcttcaacatgctgaggggctcaacaagtcactgatagaaaacagtgctatcaccctt
ggaagacttgcatgggtttgtccagagcttgtatcaccccatatggaacatttcatgcaa
gcttggtgtattgctctgtcaatgatacgtgatgatattgaaaaggaggaggcttttcgc
ggtttatgtgcagtggttaaggccaatccatctggtgctttgaattcacttgtcttcatg
tgcaaagccattgcaagttggcatgaaatagaaagtgaagatctacacaatgaaatctgc
caggttttgcatggatataagcaaatgctcaagaatggtgcttgggaacagtgcatgtct
gccttggagccctctgtgaagggcaagctgttaaagtatcaagtataa
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