Nocardia terpenica: CRH09_36525
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Entry
CRH09_36525 CDS
T05168
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ntp
Nocardia terpenica
Pathway
ntp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRH09_36525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntp03021
]
CRH09_36525
03400 DNA repair and recombination proteins [BR:
ntp03400
]
CRH09_36525
Enzymes [BR:
ntp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRH09_36525
Transcription machinery [BR:
ntp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRH09_36525
DNA repair and recombination proteins [BR:
ntp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRH09_36525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ATL70876
UniProt:
A0A291RTL1
LinkDB
All DBs
Position
complement(8197722..8201207)
Genome browser
AA seq
1161 aa
AA seq
DB search
MLEGRILAVSTQTKAGIPGAPKRVSFAKIREPLEVPGLLDLQTESFAWLIGSPDWRERAI
ARGDVDPFGGIEEVLEELSPIEDFSGAMSLSFSGPRFEEVKASIEECKDKDMTYAAPLFV
TAEFINNNTGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDESIDKGT
EKLLHSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGMTTEEIVDRFGFS
EIMISTLEKDNTAGQDEALLDIYRKLRPGEPPTKESAQNLLEGLFFKEKRYDLARVGRYK
VNKKLGLHSGEPVVGSVLTREDIVATIEYLVRLHQGEKVMTVPGGTEVPVDVDDIDHFGN
RRLRTVGELIQNQLRVGLSRMERVVRERMTTQDVEAITPQTLINIRPITAAIREFFGTSQ
LSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLSVYARVNPFGFIETPYRRVDNGRVTDEVRYLTADEEDREVRAQANSPVDANGNFL
EERVLARRGNEEMEYVDPTEVTYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQA
VPLIRSESPLVGTGMELRAAVDAGDVVVNEKPGVVEEVSADYITVMHDDGTRRSYRMRKF
ARSNQGTCANQRPIVDEGQRVEKGQVLADGPCTDSGEMALGKNLLVAIMPWEGHNYEDAI
ILSQRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAE
VRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSR
EDDDDLPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPKEDMPFLPDGTPVDI
ILNTHGVPRRMNIGQVLETHLGWIAKAGWKVDGTPEWAANLPEEMWGQEADTNIATPVFD
GAREEELTGLLGSTLPNRDGETMVNADGKAVLLDGRSGEPFPYPVAVGYMYILKLHHLVD
DKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDVVG
RVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLERA
AANLGINLSRNEAATVDDLAQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacgcatcttggcagtctccacccagaccaaggccggtatccccggagcc
ccgaagcgggtgtctttcgcgaagatccgtgagcctctcgaggttccgggtcttctcgat
ctacaaaccgaatcgttcgcctggctgatcggttccccggattggcgtgagcgggcgatc
gcccgtggcgacgtcgatccgttcggtgggatcgaggaggtgctcgaggaactctcgccg
atcgaggacttctccggtgccatgtccctgtccttctccggcccgcgcttcgaggaggtc
aaggcctccatcgaggagtgcaaggacaaggacatgacctacgcggcgccgttgttcgtc
accgcggagttcatcaacaacaacaccggtgagatcaagtcgcagacggtgttcatgggc
gacttcccgatgatgaccgacaagggcacgttcatcatcaacggcaccgagcgcgtcgtc
gtgtcgcagctggtccgttcgcccggcgtgtatttcgacgaatccatcgacaagggcacc
gagaagctgctgcacagcgtccgcgtgatcccgagccggggcgcctggctggaattcgac
gtcgacaagcgcgacaccgtcggcgtgcgcatcgaccgcaagcgccgccagccggtcacc
gtgctgctcaaggcgctcggcatgaccaccgaggagatcgtcgaccggttcggcttctcc
gagatcatgatctccaccctggagaaggacaacaccgcaggccaggacgaggcgctgctg
gacatctaccgcaagctgcgtccgggcgagccgccgaccaaggagtccgcgcagaacctg
ctcgagggcctgttcttcaaggagaagcgctacgacctggcgcgcgtcggccgctacaag
gtcaacaagaagctgggcctgcattccggtgagccggtcgtgggctcggtgctgacccgc
gaggacatcgtcgccaccatcgagtacctggtccgcctgcaccagggcgagaaggtcatg
accgtgcccggcggcaccgaggttcccgtcgacgtcgacgacatcgaccacttcggcaac
cgccgcctgcgcaccgtcggcgagctgatccagaaccagctccgcgtcggcctgtcccgc
atggagcgggtcgtgcgcgaacgcatgaccacccaggacgtcgaggccatcacgccgcag
accctgatcaacatccgcccgatcacggcggcgatccgggagttcttcggcacctcgcag
ctgtcgcagttcatggaccagaacaacccgctgtcgggcctgacccacaagcgccgcctg
tcggcgctgggcccgggtggtctgtcccgtgagcgcgccggcctggaagtccgcgacgtg
cacccctcgcactacggccgcatgtgcccgatcgagaccccggaaggcccgaacatcggc
ctgatcggttcgctgtcggtgtatgcgcgggtcaacccgttcggcttcatcgagaccccg
taccgcagggtcgacaacggccgcgtcaccgacgaggtccgctacctcaccgccgacgag
gaggaccgcgaggtccgcgcccaggcgaactcgccggtcgacgcgaacggcaacttcctc
gaggagcgggtgctcgcgcgccgcggcaacgaggagatggagtacgtcgacccgaccgag
gtcacctacatggatgtctcgccgcgccagatggtgtcggtggcgaccgccatgatcccg
ttcctcgagcacgacgacgccaaccgcgctctcatgggcgcgaacatgcagcgtcaggcc
gtgccgctgatccgttccgagtcgccgctggtcggcaccggcatggagctgcgcgccgcc
gtcgacgcgggcgacgtggtcgtgaacgagaagcccggtgtggtggaagaggtttcggcc
gactacatcaccgtcatgcacgacgacggcacccgtcgcagctaccgcatgcgcaagttc
gcccggtccaaccagggcacctgcgccaaccagcgtcccatcgtggacgagggccagcgg
gtcgagaagggccaggttctggccgacggcccgtgcaccgacagcggtgagatggcgctg
ggtaagaacctgctggtggcgatcatgccgtgggagggtcacaactacgaggacgcgatc
atcctgtcgcagcgcctcgtggaggaggacgtgctcacctcgatccatatcgaggagcac
gaaatcgacgcccgcgacaccaaactcggcgccgaggaaatcacccgcgacatccccaac
gtctccgacgaggtcttggccgacctcgacgagcgcggcatcgtgcgcatcggtgccgag
gtccgcgacggtgacattctggtgggcaaggtgaccccgaagggtgagaccgagctgacg
ccggaggagcggttgctgcgcgcgatcttcggtgagaaggcccgcgaggtgcgcgacacc
tcgctgaaggtgccccacggtgagtccggcaaggtcatcggtattcgcgtgttctcccgg
gaggacgacgatgatctgcccccgggtgtgaacgagttggtgcgcgtgtatgtggcgcag
aagcgcaagattcaagacggtgacaagctcgccggtcgccacggcaacaagggcgtcatc
ggcaagatcctcccgaaggaggacatgccgttcctgcccgacggcacccccgtcgacatc
atcctcaacacccacggtgtgccccgccgtatgaatatcggccaggtgctggagacgcat
ctgggctggattgccaaggcgggctggaaggtagacggcaccccggagtgggccgcgaac
ctaccggaggagatgtggggccaggaggccgacaccaatatcgccaccccggtgttcgac
ggcgcccgcgaggaggagctgaccggtctgctcggctcgaccctgcccaaccgcgacggc
gagaccatggtcaacgccgacggcaaggcggtcctgctggacggccgctccggcgagccg
ttcccgtatccggtggcggtgggctacatgtacatcctgaagctgcaccacctggtggac
gacaagatccacgcgcgctcgaccggcccgtactcgatgatcacccagcagccgctgggc
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggagtgctgggccatgcaggcc
tacggcgccgcctacaccctgcaggaactgctcaccatcaaatccgacgacgtggtgggc
cgcgtgaaggtgtacgaggccatcgtcaagggcgagaacatccccgagccgggcatcccc
gaatcgttcaaggtgctgctcaaggaacttcagtcgctgtgcctcaacgtcgaggtgctg
tcctcggacggcgccgcgatcgagatgcgcgacggcgacgacgaggacctcgagcgtgcc
gcggcgaatctcggcatcaacctgtcccgcaacgaggctgcgacggtcgacgacctggcg
cagtga
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integrated database retrieval system
