KEGG   Novibacillus thermophilus: B0W44_15040
Entry
B0W44_15040       CDS       T04694                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ntr  Novibacillus thermophilus
Pathway
ntr02020  Two-component system
ntr02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ntr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B0W44_15040
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    B0W44_15040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ntr03021]
    B0W44_15040
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ntr02035]
    B0W44_15040
Transcription machinery [BR:ntr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B0W44_15040
Bacterial motility proteins [BR:ntr02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    B0W44_15040
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 HTH_5 UPF0122 CT_C_D MarR RE_NgoFVII_C HTH_28 Sigma70_ECF
Other DBs
NCBI-ProteinID: AQS56867
UniProt: A0A1U9K9X9
LinkDB
Position
complement(3084998..3085801)
AA seq 267 aa
MEVKKIEEKETGEELPLSEWWKAWRERRDKKAQERLVKKYLPLVEYVANRLSVGLSSSVK
KEDLISYGRIGLLDAVNKFEYERGLQFETYAIWRIRGAMIDGLRQEDWLSRSLREKTKKI
EEAYSALEQKLLRSVTDEELCEHLGLSLRELHKLLSDTAFANMLSMDDPVLDEEGESSRH
FLVADRKEKEPESILDREQTKVILAETIERLPEKERLVVNLFYYEELTLTEIARIMNLSP
SRISQLHSKALYRMRTALKRHQSLVTS
NT seq 804 nt   +upstreamnt  +downstreamnt
atggaagtgaagaaaatagaagaaaaagagacaggcgaggaacttccactttcggaatgg
tggaaggcgtggcgtgaacgccgggacaaaaaagctcaagaacgattggttaaaaagtac
ttgccgttagtcgaatatgtcgccaaccgcctgtccgtcgggttgtcgagttccgtcaag
aaggaagacttgatcagttacggccgaatcgggttgctcgatgccgtcaacaaatttgaa
tacgaacgggggctacagtttgaaacgtatgccatttggcgcattcgcggcgcgatgatc
gacgggttgagacaagaagactggctgtcccgttcactgagagaaaagacgaaaaaaatt
gaggaagcgtacagcgccctcgaacaaaaattgcttcgatccgtgacagacgaagaactg
tgtgagcacttggggttgtcattgcgtgagttgcacaaacttttgtccgacaccgctttt
gccaacatgttgtctatggacgaccctgtcctcgacgaagaaggggaaagttcccgccac
tttctcgtagccgaccgcaaagaaaaagagcctgaaagcattttggaccgggaacaaacg
aaagtgattctggcagagacgatcgagcgccttccggaaaaagagcgcctcgttgtcaat
ctgttttactacgaagaactgacgttgacagagatcgcccgaattatgaacttgtcacca
tcccgcatctcgcagctccattccaaagcgctgtaccggatgcggacggctctgaaacgg
catcaaagcttagtcacttcatag

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