Novibacillus thermophilus: B0W44_15040
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Entry
B0W44_15040 CDS
T04694
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
ntr
Novibacillus thermophilus
Pathway
ntr02020
Two-component system
ntr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ntr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B0W44_15040
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B0W44_15040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntr03021
]
B0W44_15040
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ntr02035
]
B0W44_15040
Transcription machinery [BR:
ntr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B0W44_15040
Bacterial motility proteins [BR:
ntr02035
]
Flagellar system
Flagellar assembly proteins
Stator
B0W44_15040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_5
UPF0122
CT_C_D
MarR
RE_NgoFVII_C
HTH_28
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AQS56867
UniProt:
A0A1U9K9X9
LinkDB
All DBs
Position
complement(3084998..3085801)
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AA seq
267 aa
AA seq
DB search
MEVKKIEEKETGEELPLSEWWKAWRERRDKKAQERLVKKYLPLVEYVANRLSVGLSSSVK
KEDLISYGRIGLLDAVNKFEYERGLQFETYAIWRIRGAMIDGLRQEDWLSRSLREKTKKI
EEAYSALEQKLLRSVTDEELCEHLGLSLRELHKLLSDTAFANMLSMDDPVLDEEGESSRH
FLVADRKEKEPESILDREQTKVILAETIERLPEKERLVVNLFYYEELTLTEIARIMNLSP
SRISQLHSKALYRMRTALKRHQSLVTS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagaaaatagaagaaaaagagacaggcgaggaacttccactttcggaatgg
tggaaggcgtggcgtgaacgccgggacaaaaaagctcaagaacgattggttaaaaagtac
ttgccgttagtcgaatatgtcgccaaccgcctgtccgtcgggttgtcgagttccgtcaag
aaggaagacttgatcagttacggccgaatcgggttgctcgatgccgtcaacaaatttgaa
tacgaacgggggctacagtttgaaacgtatgccatttggcgcattcgcggcgcgatgatc
gacgggttgagacaagaagactggctgtcccgttcactgagagaaaagacgaaaaaaatt
gaggaagcgtacagcgccctcgaacaaaaattgcttcgatccgtgacagacgaagaactg
tgtgagcacttggggttgtcattgcgtgagttgcacaaacttttgtccgacaccgctttt
gccaacatgttgtctatggacgaccctgtcctcgacgaagaaggggaaagttcccgccac
tttctcgtagccgaccgcaaagaaaaagagcctgaaagcattttggaccgggaacaaacg
aaagtgattctggcagagacgatcgagcgccttccggaaaaagagcgcctcgttgtcaat
ctgttttactacgaagaactgacgttgacagagatcgcccgaattatgaacttgtcacca
tcccgcatctcgcagctccattccaaagcgctgtaccggatgcggacggctctgaaacgg
catcaaagcttagtcacttcatag
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