Nematostella vectensis (starlet sea anemone): 116601241
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Entry
116601241 CDS
T01037
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-like isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nve03016
]
116601241
Enzymes [BR:
nve01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
116601241
Transfer RNA biogenesis [BR:
nve03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
116601241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
116601241
NCBI-ProteinID:
XP_032217913
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MADTKLRNLRRKKGAKHQRKEPPFPIPVQTLTGKTSCDERWFYYTGHFRGVSVVVESSGD
IVDLYRMGFFGKGNLSRSKPEYDVLSNISQRAFSKSDKLRRLPPKERQIRQSKFREIRKE
RYRNHCKWRKLATEKQSCSVEREPSPPETHMTQDLYSDDSESESDGEKDFQANENDDDEG
NGDSSGDGHDDDDDDDKDVTEVIKDVLKHSKPCNKRPESNDSCLPAKRPDPYPVFEQLHL
SLEEAFFLSYGLGCLCVLDKEREMNLNDMWQAFCAASPDFLQKYIVYHYLRSKGWVPKTG
LKYGTDYVIYKEGMPFYHSSYSVVVQLVEEKSLDTQNVVQSRPLTWCSLCGLSRVNEHAA
KEVMICYVIKPSEIMKEDLILPSCIPRFKVQEVVMRRWIPERAREPDKP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactaaactcagaaacctgcgaaggaaaaaaggcgctaaacaccagcgaaaa
gagccaccatttccaatcccggtgcagactttgactggaaaaacaagttgcgatgagcga
tggttttactacacgggacattttcgcggagtctccgtggtcgtggagagctctggggat
atagttgatctttaccgcatgggattttttgggaaaggtaacctgtcacgaagtaaacca
gagtacgatgtcttgtctaacatatcccagcgagcattctccaaatcggacaagcttagg
agattgcctcctaaggaaagacagattaggcaatcaaaattcagagagatcagaaaagaa
agatatagaaatcattgcaaatggagaaagttagcaacagaaaaacaaagctgctcagtt
gagagagagccatctccaccagagactcacatgacacaagatttgtactctgatgacagt
gagagtgagagtgatggtgaaaaagactttcaagctaatgagaacgatgatgatgaaggt
aatggtgatagcagtggtgatggtcatgatgatgatgatgatgatgataaagatgttacg
gaggtcataaaagatgttttaaagcattccaagccctgcaacaaaagaccagaatcaaat
gactcttgtctgccagctaaaagacctgacccatatcctgtgtttgagcagcttcatctc
agcttagaggaggctttctttttatcttatgggttgggctgtttgtgtgtattggacaaa
gagagggagatgaatctaaatgacatgtggcaagccttctgtgcagcaagtccagacttt
ttgcagaaatacatagtctaccactacctgcgctcaaaaggatgggtcccaaaaactggg
ctaaaatatggaacagattatgtcatttataaggaagggatgccattttatcattcaagc
tactctgttgttgttcagttggtagaagagaagtcacttgacacacaaaatgttgtacaa
agcagaccgctgacgtggtgtagtctgtgtgggctcagcagggtcaatgaacatgctgca
aaggaagtaatgatctgctatgtgataaaaccctctgaaataatgaaagaggatcttatt
cttccatcctgcattccaagattcaaagtacaggaggttgttatgagacgatggattcct
gaaagggcaagagaaccagataaaccatga
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